Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 237 a.a., Transcriptional regulatory protein OmpR from Azospirillum sp. SherDot2

 Score =  156 bits (394), Expect = 4e-43
 Identities = 87/230 (37%), Positives = 131/230 (56%), Gaps = 5/230 (2%)

Query: 6   ILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGLLL 65
           IL V+D++  R  L S    EGY V  A +     Q L   P++LV+ D+ LP  +GL L
Sbjct: 3   ILAVDDDEPIRELLASYLAGEGYRVTTAQDTASARQALDGEPVDLVVCDLRLPDGDGLGL 62

Query: 66  ARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLL---SRSM 122
            R++R ++ + ++ L+ +D +VD+I+GLE+GADDY+TKPFNPREL  R + +L   S   
Sbjct: 63  VRQIRTESQIPVIILSSKDQDVDRIVGLELGADDYLTKPFNPRELLARIKAVLRRVSNDA 122

Query: 123 HAGTTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQTR 182
               + EE R+V +  F  WELD+ ++ L   +G   +L ++EF  L  F + P ++ TR
Sbjct: 123 RPARSPEELRAVVQ--FANWELDLTAQRLRGQEGREVELTKAEFGLLAAFVKRPQRVLTR 180

Query: 183 ADLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRF 232
             LL        +  DR++DV I R+R+  E+    P II T  G GY F
Sbjct: 181 DQLLDLTRVDGAEVFDRSIDVLILRLRRKIEANPKEPRIIKTERGAGYVF 230