Pairwise Alignments

Query, 286 a.a., endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., Endonuclease IV (EC 3.1.21.-) from Enterobacter asburiae PDN3

 Score =  384 bits (985), Expect = e-111
 Identities = 190/282 (67%), Positives = 219/282 (77%)

Query: 4   KLIGAHVSASGGVELAPVRAHEIGANAFALFTKNQRQWAAKPLEASSIRAFKANCKKWGF 63
           K +GAHVSA+GG+  A +RA EI A AFALFTKNQRQW A PL A  I  FKA C+K+ +
Sbjct: 2   KYVGAHVSAAGGLANAAIRAAEIEATAFALFTKNQRQWRAAPLTADVIDDFKAACEKYHY 61

Query: 64  GSEAILPHDSYLINLGAPEPEKLDKSRAAFVDEMLRCDQLGLTLLNFHPGSHLQQVSEEA 123
           G   ILPHDSYLINLG P  E L+KSR AF+DE+ RC+QLGLTLLNFHPGSHL Q+ E+A
Sbjct: 62  GPGQILPHDSYLINLGHPVEEALEKSREAFLDEVQRCEQLGLTLLNFHPGSHLMQIDEDA 121

Query: 124 CLATIAESINLAHRQVPNVIAVIENTAGQGSNLGWRFEHLAAIIDQVEDKERVGVCLDTC 183
           CLA IAESIN+   +   V AVIENTAGQGSNLG+RFEHLAAIID VEDK RVGVC+DTC
Sbjct: 122 CLARIAESINITLDKTKGVTAVIENTAGQGSNLGFRFEHLAAIIDGVEDKSRVGVCIDTC 181

Query: 184 HTFAAGYDLRTKAACDETFAEFERVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGEIGW 243
           H FAAGYDLRT  A   TF EFER+VG  YLR MH+ND+K    SRVDRHHSLG G IG 
Sbjct: 182 HAFAAGYDLRTTEATKNTFDEFERIVGFKYLRGMHLNDAKSAFGSRVDRHHSLGEGNIGH 241

Query: 244 ECFEYIAQDARFNGIPLILETIDPDIWATEIATLRKFSTQKE 285
           + F +I QDARF+GIP++LETI+PDIWA EIA L+   T ++
Sbjct: 242 DAFRFIMQDARFDGIPMVLETINPDIWAEEIAWLKAQQTAEQ 283