Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., sodium:alanine symporter from Pseudomonas simiae WCS417

 Score =  448 bits (1153), Expect = e-130
 Identities = 223/471 (47%), Positives = 321/471 (68%), Gaps = 9/471 (1%)

Query: 4   LINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSRKADNAGISSFQA 63
           ++ ++ND L G +L+ L+VG+G YFT+R  F+Q RHF H F+V K+S K+    +SSFQA
Sbjct: 1   MLEVINDFLSGKVLIVLIVGLGGYFTIRSRFVQLRHFFHMFSVFKDSLKSSAGQLSSFQA 60

Query: 64  LCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDKDG 123
           L  SLA RVG GN+AGV +A+T GGPGA+FWMW+ A++GM++SF E +L QLYK  D +G
Sbjct: 61  LMLSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFIECSLGQLYKRTDAEG 120

Query: 124 NYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEPMLIGI 183
            YRGGPAYY++ GL  RW+G++ +  L++ FG  FN +QA+++T+++  AFG +    G+
Sbjct: 121 TYRGGPAYYIQHGLQKRWLGMVMAFLLLVTFGFAFNGLQAHAVTHSLNNAFGLDTTYTGL 180

Query: 184 GIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIFKSAFG 243
            + +L   V  GGI++IA  A+L+VP     Y+A+ L+V+V+ ++ VP  ++ I KSAFG
Sbjct: 181 ALAVLLGLVFIGGIKRIASIADLLVPVKTLVYIAVTLYVIVLQFDHVPAMLATIVKSAFG 240

Query: 244 LQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQMLGV 303
           L +A  G +G AI    I GVKRG+F+NEAG+GSAPN AA A+    HP +QG VQ   V
Sbjct: 241 LDQAFGGLVGSAI----IMGVKRGVFANEAGLGSAPNVAAVAS--VEHPIAQGVVQAFSV 294

Query: 304 FIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDWGGIFIAFAIFFFAFTS 363
           F+DT VICT T  +IL+SG Y P  E  GI LTQ +L++ VGDWG +FI+ A+  F FTS
Sbjct: 295 FLDTFVICTCTALLILLSGFYTPGFEGDGIALTQNSLAAVVGDWGRMFISVALALFVFTS 354

Query: 364 IIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGLMAIVN 423
           I+ NY   E+NL FL  NN+K L+ +R + L ++ +GS+  L TV+A AD++M ++A VN
Sbjct: 355 IMYNYYLGESNLRFLVGNNRKVLMGYRALVLVLIFWGSIENLSTVFAFADITMTMLAFVN 414

Query: 424 LVAILLLSGIVIKLAKDYNRQLDAG-KVPTFDANDYPELKSQLEDGIWDNN 473
           L A+  L  I +++  DY+ Q  AG K P FD++ +P+L   L+   W  N
Sbjct: 415 LFALAFLFKIAMRILNDYDNQRAAGIKTPVFDSSQFPDL--DLDRKAWPAN 463