Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., Sodium/alanine symporter from Pseudomonas putida KT2440

 Score =  434 bits (1117), Expect = e-126
 Identities = 224/471 (47%), Positives = 317/471 (67%), Gaps = 10/471 (2%)

Query: 4   LINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSRKADNAGISSFQA 63
           ++ ++ND L G +L+ L+VG+G YFT+R  F+QFRHFTH F+V K S +     +SSFQA
Sbjct: 1   MLEVINDFLSGKLLIVLIVGLGSYFTIRSRFVQFRHFTHMFSVFKESLRGQAGQLSSFQA 60

Query: 64  LCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDKDG 123
           L  SLA RVG GN+AGV +A+T GGPGA+FWMW+ A++GM++SF E TLAQ+YK  D DG
Sbjct: 61  LMLSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFFECTLAQVYKRADGDG 120

Query: 124 NYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEPMLIGI 183
            YRGGPAYY++ GL  + M ++FSI L++ +G  F  +Q+ ++T++++ AF F+P   GI
Sbjct: 121 LYRGGPAYYIQHGLKRKSMAIVFSILLLVTYGFAFIGLQSYTVTHSLQNAFAFDPSHTGI 180

Query: 184 GIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIFKSAFG 243
            + +L A    GGI++IA  ++L+VP    AY+ + L+V+    E VP  +  IFKSAFG
Sbjct: 181 VLAVLLAITFIGGIKRIAAVSDLLVPVKTLAYIGVTLYVIGTQIEHVPAMLETIFKSAFG 240

Query: 244 LQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQMLGV 303
           L  A AG LG AI    + GVKRG+F+NEAG+GSAPN AA A     HP +QG VQ   V
Sbjct: 241 LDPAFAGLLGSAI----VMGVKRGVFANEAGLGSAPNVAAVAA--VKHPGAQGVVQAFSV 294

Query: 304 FIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDWGGIFIAFAIFFFAFTS 363
           F+DT VICT T  +IL+SG Y P  E  GI LTQ +L++ VGDWG +F++ A+  F FT 
Sbjct: 295 FLDTFVICTCTALLILLSGFYTPGFEGDGIVLTQNSLAAVVGDWGRVFVSVALSLFVFTC 354

Query: 364 IIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGLMAIVN 423
           I+ NY   E +L FL   N+  L++FR + L +V++GS+  L TV+A AD++M  +A VN
Sbjct: 355 ILYNYYLGENSLQFLS-RNRVVLMVFRGLVLALVVWGSMQDLSTVFAFADITMTCLAFVN 413

Query: 424 LVAILLLSGIVIKLAKDYNRQLDAG-KVPTFDANDYPELKSQLEDGIWDNN 473
           LVA+ LL  + +++ +DY+ Q  AG K P FD++ + +L   L+   W  N
Sbjct: 414 LVALALLFKVGLRVMRDYDDQRKAGVKQPVFDSSKFADL--DLDRNAWPAN 462