Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., Putative ion:amino acid symporter from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  227 bits (578), Expect = 8e-64
 Identities = 142/446 (31%), Positives = 230/446 (51%), Gaps = 24/446 (5%)

Query: 1   MTDLINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRH----FTHTFTVLKNSRKADNA 56
           M + ++ + + LWG  L   ++G+G YFT+RL F Q  +    + +T   L    K +  
Sbjct: 1   MLEQLSQLFEFLWGGPLFLCVIGIGFYFTVRLNFFQIINLKDIYRNTIGTLAGKNKQNTT 60

Query: 57  G-------ISSFQALCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAE 109
           G       + S +   T L+  +G G +AGVA A+  GGPGAIFWMW+IA++GM T   E
Sbjct: 61  GEVASKKSLKSIEVAATVLSGSLGAGTIAGVAAAIAVGGPGAIFWMWIIAVVGMMTKMVE 120

Query: 110 STLAQLYKTRDKDGNYRGGPAYYMEKGLGMRW--MGVLFSIFLIIAFGLVFNAVQANSIT 167
            TLA  Y+++ ++G Y GGP +Y++KGL  +W  +  L++  L+I        VQ N++ 
Sbjct: 121 VTLAVKYRSKGENGEYYGGPMHYIKKGLNKKWHPLAGLYAFALMILVITDACFVQTNTMA 180

Query: 168 NAMKTAFGFEPMLIGIGIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNY 227
             +   F     +IG  IV++ A VI  G+  + +   + +P +  AY   A  VVV+N 
Sbjct: 181 AVIHYTFDIPTSVIGGFIVIVGALVILKGLSSLGKFCTIALPPITIAYFIGAAGVVVLNI 240

Query: 228 EKVPDAISLIFKSAFGLQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATP 287
           E +P  I  IF  AF    AA G +G  I  A+  G  RG+F+NEAGMG+  +A   AT 
Sbjct: 241 EAIPQVIKSIFYYAFAPAPAAGGFVGSTIMMAISKGASRGIFTNEAGMGT--SATVHATA 298

Query: 288 YPPHPASQGYVQMLGVFIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDW 347
              +   QG    + VF  +++ C  T   +L SG +       GI++   AL      W
Sbjct: 299 NVDYAFRQGMWGAVEVFFVSMITCNFTAFAVLASGMWT-DASYQGIQIIFAALKE---TW 354

Query: 348 GGIFI---AFAIFFFAFTSIIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLAT 404
             I +      +    FTS + +Y    T++ ++   +K   ++  L FL  ++  ++  
Sbjct: 355 HPIIVQVLCLGVALILFTSYLGSYIKFRTSINYI-FGDKLERIIKWLYFLPPLIAVNM-E 412

Query: 405 LPTVWAMADVSMGLMAIVNLVAILLL 430
           +P +W MAD+++G + I N++A+ LL
Sbjct: 413 IPVIWLMADIAVGFLVIPNVIALFLL 438