Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., amino acid carrier protein from Kangiella aquimarina DSM 16071

 Score =  268 bits (684), Expect = 5e-76
 Identities = 147/306 (48%), Positives = 190/306 (62%), Gaps = 4/306 (1%)

Query: 19  YLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNS-RKADNAGISS-FQALCTSLAARVGTGN 76
           YLL+GVG++FTL LGF Q R+F     +++    K D+ G +S FQAL T+L+  VGTGN
Sbjct: 26  YLLIGVGVFFTLYLGFPQIRYFGQATRIVRGQYAKKDSPGDTSHFQALTTALSGTVGTGN 85

Query: 77  MAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDKDGNYRGGPAYYMEKG 136
           + GVA+A+  GGP A+FWMW+ A  GM T F E TL+  Y+ + +DG   GGP YYMEK 
Sbjct: 86  IGGVALAIFIGGPAALFWMWVTAFFGMTTKFVEVTLSHKYREKTEDGTMAGGPMYYMEKK 145

Query: 137 LGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEPMLIGIGIVLLTAFVIFGG 196
           L M+W+ V+F++  II+     N  Q N+I   M T F  E  + G  + +L A VI GG
Sbjct: 146 LNMKWLAVIFALATIISSIGSGNMPQINNIAQVMNTTFNIEEWVTGGVLAVLLALVIIGG 205

Query: 197 IRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIFKSAFGLQEAAAGGLGYAI 256
           I++IA+ AE IVPFMA  Y+  AL V+  NYE +  +   IF S F    A  G LG + 
Sbjct: 206 IKRIAKVAEKIVPFMAVVYVIGALLVIGYNYENILPSFQAIFSSIFSGSAAVGGFLGASF 265

Query: 257 AQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQMLGVFIDTIVICTATVA 316
           A AM  GV RGLFSNEAG GSA  A A +      PAS+G V +L  FIDTI+ICT T  
Sbjct: 266 AYAMDRGVNRGLFSNEAGQGSA--AIAHSAAKGKEPASEGMVSLLEPFIDTIIICTLTGL 323

Query: 317 IILMSG 322
           +IL SG
Sbjct: 324 VILSSG 329



 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 7/125 (5%)

Query: 318 ILMSGEYVPHG-ELTGIELTQRALSSQVGDWGGIFIAFAIFFFAFTSIIANYSYAETNLI 376
           I++ G+ + H  ELT +  T+      +G+ G   ++  +  FAFT+ IA   Y +   I
Sbjct: 433 IVVEGKSLIHSAELTAVAFTK----GYMGESGKYVVSLGLLLFAFTTAIAWSYYGDRAAI 488

Query: 377 FLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGLMAIVNLVAILLLSGIVIK 436
           +L     K ++ +R+ F+ +   G++     VW +A V++ LM I NL+ ILLL   +  
Sbjct: 489 YLF--GPKSVLPYRIAFVALFFLGAIVDSTVVWTLAYVTVALMTIPNLIGILLLHKDMKN 546

Query: 437 LAKDY 441
             KDY
Sbjct: 547 TVKDY 551