Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., Uncharacterized transporter YaaJ from Escherichia coli ECRC62

 Score =  506 bits (1302), Expect = e-148
 Identities = 242/472 (51%), Positives = 330/472 (69%)

Query: 1   MTDLINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSRKADNAGISS 60
           M D  + +N +LWGS+++YLL G G +FT R GF+QFR+       LKNS      G++S
Sbjct: 1   MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFGKSLKNSIHPQPGGLTS 60

Query: 61  FQALCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRD 120
           FQ+LCTSLAARVG+GN+AGVA+A+TAGGPGA+FWMW+ A +GMATSFAE +LAQLYK RD
Sbjct: 61  FQSLCTSLAARVGSGNLAGVALAITAGGPGAVFWMWVAAFIGMATSFAECSLAQLYKERD 120

Query: 121 KDGNYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEPML 180
            +G +RGGPA+YM +GLGMRWMGVLF++FL+IA+G++F+ VQAN++  A+  +F F P++
Sbjct: 121 VNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSGVQANAVARALSFSFDFPPLV 180

Query: 181 IGIGIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIFKS 240
            GI + +     I  G+  +AR  +  VP MA  ++  ++ + V+N  ++P  I  IF+S
Sbjct: 181 TGIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLTSMVICVINIGQLPHVIWSIFES 240

Query: 241 AFGLQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQM 300
           AFG QEAA G  GY ++QA+ NG +R +FSNEAGMGSAPNAAA+A  +PPHPA+QG VQM
Sbjct: 241 AFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMGSAPNAAAAAASWPPHPAAQGIVQM 300

Query: 301 LGVFIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDWGGIFIAFAIFFFA 360
           +G+FIDT+VICTA+  +IL++G    +  L GI+L Q+A+   +G WG  F+   +  FA
Sbjct: 301 IGIFIDTLVICTASAMLILLAGNDTTYMPLEGIQLIQKAMRVLMGSWGAEFVTLVVILFA 360

Query: 361 FTSIIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGLMA 420
           F+SI+ANY YAE NL FL  NN K +   R+     V+ G+L +LP +W +AD+ M  MA
Sbjct: 361 FSSIVANYIYAENNLFFLRLNNPKAIWCLRICTFATVIGGTLLSLPLMWQLADIIMACMA 420

Query: 421 IVNLVAILLLSGIVIKLAKDYNRQLDAGKVPTFDANDYPELKSQLEDGIWDN 472
           I NL AILLLS +V  +A DY RQ   G  P FD   YP++  QL    WD+
Sbjct: 421 ITNLTAILLLSPVVHTIASDYLRQRKLGVRPVFDPLRYPDIGRQLSPDAWDD 472