Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., Amino-acid carrier protein AlsT from Alteromonas macleodii MIT1002

 Score =  260 bits (664), Expect = 9e-74
 Identities = 139/321 (43%), Positives = 199/321 (61%), Gaps = 5/321 (1%)

Query: 5   INLMNDLLWGSI-LVYLLVGVGIYFTLRLGFIQFRHFTHTFTVL--KNSRKADNAGISSF 61
           + +++  L G+    Y+L+GVG++FT+ L F Q R F H + V+  K  +++D    + F
Sbjct: 8   LTMLDGFLGGAFWFPYVLLGVGLFFTIYLKFPQIRFFKHAWQVVTGKFDKESDPGDTTHF 67

Query: 62  QALCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDK 121
           +AL T+L+  VGTGN++GVA A+  GGP A+FWMW+ A LGM T F E TL+  Y+ + +
Sbjct: 68  RALTTALSGTVGTGNISGVAFAIFLGGPAALFWMWVTAFLGMTTKFVEVTLSHKYRVKTE 127

Query: 122 DGNYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEPMLI 181
           DG   GGP YYM++ L M+W+ V F++  +++     N  Q+N I  +++  FGFEP ++
Sbjct: 128 DGTMAGGPMYYMDRRLNMKWLAVAFAVATVVSSFGTGNLPQSNGIAQSIEATFGFEPWIV 187

Query: 182 GIGIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIFKSA 241
           G  + +L A VI GGI++IA     +VP MA  YL  AL V+  N + +  + S +   A
Sbjct: 188 GSVLGILLALVILGGIQRIAAFTARVVPVMAVIYLIGALAVIFANLDNIGPSFSAVIGDA 247

Query: 242 FGLQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQML 301
           F    AA G LG ++A A   GV RGLFSNEAG GSAP A A+A      PAS+G V +L
Sbjct: 248 FTGSAAAGGFLGASLAYAFNRGVNRGLFSNEAGQGSAPIAHAAAK--TKEPASEGMVSLL 305

Query: 302 GVFIDTIVICTATVAIILMSG 322
             FIDTI+ICT T  +IL SG
Sbjct: 306 EPFIDTILICTVTGLVILSSG 326



 Score = 45.8 bits (107), Expect = 4e-09
 Identities = 30/123 (24%), Positives = 64/123 (52%), Gaps = 7/123 (5%)

Query: 320 MSGEYVPHGE-LTGIELTQRALSSQVGDWGGIFIAFAIFFFAFTSIIANYSYAETNLIFL 378
           +SG+ + H   LT I  T+       GD+G   ++  +  FAF++ IA   Y +  + +L
Sbjct: 430 VSGKSLVHSAALTTIAFTRGFF----GDFGQYIVSIGLMLFAFSTAIAWSYYGDRAMTYL 485

Query: 379 EHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGLMAIVNLVAILLLSGIVIKLA 438
                + ++ +R++++   ++ + +    VWA++ V++ +M + NL  I+LL   + +  
Sbjct: 486 F--GPRSVMPYRVIYVAGFVWAAFSDTTLVWALSAVAIVVMTLPNLFGIMLLCKEMKETV 543

Query: 439 KDY 441
            DY
Sbjct: 544 NDY 546