Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Amino-acid carrier protein AlsT from Alteromonas macleodii MIT1002

 Score =  501 bits (1291), Expect = e-146
 Identities = 242/473 (51%), Positives = 346/473 (73%), Gaps = 8/473 (1%)

Query: 1   MTDLINLMNDLLWGS--ILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSRKADNAGI 58
           + + ++L+N++LWG   +L+ +L+  GI+FT++LG +Q RHF H F++LK S  +   GI
Sbjct: 2   INEFVSLVNNILWGDGQVLIIMLLACGIWFTVKLGGVQLRHFGHMFSLLKGSNTSTKDGI 61

Query: 59  SSFQALCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKT 118
           SSFQALCTSL+ARVGTGN+AGVAVA++ GG GAIFWMW+IA+LGMAT FAES L QLYK 
Sbjct: 62  SSFQALCTSLSARVGTGNLAGVAVAISLGGAGAIFWMWMIALLGMATGFAESVLGQLYKV 121

Query: 119 RDKDGNYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEP 178
           RD++G +RGGPAYY+++GL   W+ V FS+ L   +G VF+AVQAN+IT+A+  A+ F  
Sbjct: 122 RDENGEFRGGPAYYIKQGLNKTWLAVAFSLCLFFGYGFVFSAVQANTITDALNNAYSFPT 181

Query: 179 MLIGIGIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIF 238
             +G+ I+ L A ++ GG++ IAR AE +VPFM   Y+ +AL +  +N  ++P  +  I 
Sbjct: 182 EYVGLAIIALAALIVVGGLKSIARFAEFVVPFMGIGYVLVALAITFINISELPAMLLDIV 241

Query: 239 KSAFGLQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYV 298
           KSAFGLQEA AG LG AI     NG++RGL+SNEAG GS P+AAASA P P HP SQGY+
Sbjct: 242 KSAFGLQEAGAGALGAAIK----NGIQRGLYSNEAGSGSVPHAAASAVPNPNHPVSQGYI 297

Query: 299 QMLGVFIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDWGGIFIAFAIFF 358
           QMLGVF+DT+V+CT+T  IIL++G      ++ GI LTQ A+SS +G+ G  F+A AI  
Sbjct: 298 QMLGVFLDTLVLCTSTAFIILLAGG-SSSDQMEGIRLTQDAMSSHLGEGGTDFVAAAISL 356

Query: 359 FAFTSIIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGL 418
           FAFTS++ANY+Y E+NL   + +NK G  ++ + +LGM+ +G+ A LP VWAMAD+++GL
Sbjct: 357 FAFTSVVANYAYGESNLHMFKLDNKIGRAVYTIGYLGMIYWGAQAALPQVWAMADMALGL 416

Query: 419 MAIVNLVAILLLSGIVIKLAKDYNRQLDAGKVPTFDANDYPELKSQLEDGIWD 471
           M ++N++AI+ ++  ++ ++KDY ++ D+G    + A D  E++ + EDGIWD
Sbjct: 417 MTVINIIAIVWMTPTIVSISKDYFKKKDSGANMEYKAGDC-EIQGKSEDGIWD 468