Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., Amino-acid carrier protein AlsT from Acinetobacter radioresistens SK82

 Score =  473 bits (1217), Expect = e-138
 Identities = 246/484 (50%), Positives = 336/484 (69%), Gaps = 23/484 (4%)

Query: 5   INLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSRKA--DNAGISSFQ 62
           ++  ND LW  ++V+L+V VG+++TL  G +Q R F H+  V+K SRK   D  GI+ FQ
Sbjct: 13  VSFFNDPLWDFLVVFLVV-VGVFYTLLTGAVQIRLFLHSIRVMKGSRKEGDDQHGITPFQ 71

Query: 63  ALCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRD-K 121
           A  T LA+RVG GN+AGVA+A+  GGPGA+FWMW  A LGM+++F ES+LAQL+K RD +
Sbjct: 72  AFVTGLASRVGVGNVAGVAIAIAIGGPGAVFWMWFTAFLGMSSAFVESSLAQLFKVRDHQ 131

Query: 122 DGNYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFG------ 175
           +  +RGGPAYY+ +GL  +W+GV+F++ LI+A+G VFNAVQANSI +A   A+G      
Sbjct: 132 NQQFRGGPAYYITQGLKQKWLGVVFALSLILAYGFVFNAVQANSIVDATAHAWGWDRANI 191

Query: 176 --------FEPMLIGIGIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNY 227
                   FE   +G+ +V++TA +IFGGI++IA  AE +VP MA  YLA+AL++ ++N+
Sbjct: 192 MLDLGGLGFEVSWVGVVLVIMTAAIIFGGIKRIAVVAERMVPLMAVLYLAVALYIAIINF 251

Query: 228 EKVPDAISLIFKSAFGLQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATP 287
             +PD   LIF  AF    AA G  G  ++ AM+ G+KRGLFSNEAGMGSAPNAAA++  
Sbjct: 252 SILPDIFKLIFTEAFKFDAAAGGFFGAMVSMAMMQGIKRGLFSNEAGMGSAPNAAAASD- 310

Query: 288 YPPHPASQGYVQMLGVFIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDW 347
              HP  QG VQMLGVF+DT V+C+ T  IIL SG Y   G   G+ LTQ AL SQ+G W
Sbjct: 311 -VKHPVDQGLVQMLGVFVDTFVVCSCTAIIILASGLYHEAG-FEGVTLTQMALVSQIGSW 368

Query: 348 GGIFIAFAIFFFAFTSIIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPT 407
           G  F+A  +F FA++SII NY+YAE+N+ F+ +N  K + +FRL+ L MV FG++ ++P 
Sbjct: 369 GDDFLALILFLFAYSSIIGNYAYAESNVQFI-NNQPKVMFVFRLLVLAMVYFGAITSVPL 427

Query: 408 VWAMADVSMGLMAIVNLVAILLLSGIVIKLAKDYNRQLDAG-KVPTFDANDYPELKSQLE 466
           VW+MAD+SMGLMA +NL AILLL+  +  L KDY+ QL  G K P F  + YPELK +++
Sbjct: 428 VWSMADLSMGLMATINLFAILLLTPFLRMLLKDYSSQLKKGIKEPEFKIDKYPELKKKVD 487

Query: 467 DGIW 470
             IW
Sbjct: 488 SDIW 491