Pairwise Alignments

Query, 283 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

 Score =  119 bits (299), Expect = 5e-32
 Identities = 82/255 (32%), Positives = 129/255 (50%), Gaps = 10/255 (3%)

Query: 24  DTHCHFD---FPPFTATPELELQKAAQHGVRRLVVPSIGPQDWQAVTELAQRFPSTIYYA 80
           D+HCH D   +    A     L KA Q  V  L+   +    +  +  + + F S +Y +
Sbjct: 4   DSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPF-SQVYAS 62

Query: 81  LGFHPLYLDASSPTHLPALEKALMQAEQACVAVGECGLDGMIDVDVA-LQEQMLIAQLSM 139
            G HPL  D  S   L    +         VA+GE GLD     + A LQ+     Q+  
Sbjct: 63  CGVHPL--DVQSDFSLDLFHQYAQHPR--VVAIGETGLDYHYQPETADLQKLRFRQQIET 118

Query: 140 ASQAKLPVILHSRRTHNRLLQLLKQQRFQQ-GGVLHAFSGSVQEAQQFVDLGFKIGVGGV 198
           A     P+I+H+R      LQLL++ + QQ GGV+H F+  +  AQ  ++LGF I + G+
Sbjct: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISGI 178

Query: 199 ITYPRANKTRQAIAALPVEHIVLETDAPDMPLNGFQGQANHPAQLAKVLETLAELKGVSA 258
           +T+ +A   ++ + ALP++ +++ETD+P +     +G+ N PA + +V   +A LKGVS 
Sbjct: 179 VTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVSL 238

Query: 259 QYLAPILWQNSQMLF 273
             +A    QN Q LF
Sbjct: 239 TEVAQKTTQNFQNLF 253