Pairwise Alignments

Query, 283 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., Putative deoxyribonuclease YcfH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  114 bits (284), Expect = 3e-30
 Identities = 76/257 (29%), Positives = 130/257 (50%), Gaps = 10/257 (3%)

Query: 22  LFDTHCHFD---FPPFTATPELELQKAAQHGVRRLVVPSIGPQDWQAVTELAQRFPSTIY 78
           L D+HCH D   +       +  L KAA   V+  +  +     ++ + +L  +  + ++
Sbjct: 3   LVDSHCHLDGLDYQSLHKDVDDVLAKAAARDVKFCLAVATTLPGYRHMRKLVGKRDNVVF 62

Query: 79  YALGFHPLYLDASSPTHLPALEKALMQAEQACVAVGECGLDGMIDVDVALQEQM-LIAQL 137
            + G HPL  D +        E  L+ AE   VA+GE GLD     +  +++Q   I  +
Sbjct: 63  -SCGVHPLNQDEAYDVE----ELRLLAAEDDVVAMGETGLDYFYTPETKIRQQASFIHHI 117

Query: 138 SMASQAKLPVILHSRRTHNRLLQLLKQQRFQQ-GGVLHAFSGSVQEAQQFVDLGFKIGVG 196
            +  +   PVI+H+R      L +L++++    GGVLH F+   + A + +DLGF I   
Sbjct: 118 QIGRELHKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFS 177

Query: 197 GVITYPRANKTRQAIAALPVEHIVLETDAPDMPLNGFQGQANHPAQLAKVLETLAELKGV 256
           G++T+  A + R A   +P++ +++ETD+P +     +G+ N PA +  V E +A LKGV
Sbjct: 178 GIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGV 237

Query: 257 SAQYLAPILWQNSQMLF 273
           + + LA I   N   LF
Sbjct: 238 AVEELAQITTDNFARLF 254