Pairwise Alignments

Query, 283 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., 3'-5' ssDNA/RNA exonuclease TatD from Dickeya dianthicola ME23

 Score = 95.9 bits (237), Expect = 8e-25
 Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 9/259 (3%)

Query: 22  LFDTHCHFDFPPFTATPELELQKAAQHGVRRLVVPSIGPQDWQAVTELAQRFPSTIYYAL 81
           +FD   +   P F +  E  + +A Q GV  L++     ++ +    LA ++P   +   
Sbjct: 1   MFDIGVNLTSPQFRSDREQVVARARQAGVTGLLLTGTSAEESERACLLAAQYPDYCWSTA 60

Query: 82  GFHPLYLDASSPTHLPALEKALMQAEQACVAVGECGLDGMIDVDVAL-QEQMLIAQLSMA 140
           G HP   DAS      A     +   +  +A+GECGLD   +      QEQ   AQL++A
Sbjct: 61  GVHPH--DASGWNDDAAGRIHQLAGSEQVLAIGECGLDFNRNFSTPQEQEQAFSAQLAIA 118

Query: 141 SQAKLPVILHSRRTHNRLLQLLKQQRFQ-QGGVLHAFSGSVQEAQQFVDLGFKIGV-GGV 198
           ++  +PV LH R  H R + LL     +    VLH F+GS  E    V  G  +G+ G V
Sbjct: 119 AERAMPVFLHCRDAHTRFMALLTPWLGKLPAAVLHCFTGSGDELDDSVRAGLMVGITGWV 178

Query: 199 ITYPRANKTRQAIAALPVEHIVLETDAPDMPLNGFQ----GQANHPAQLAKVLETLAELK 254
               R    R  +  +P + ++LETDAP +           + N P  L  ++  +A  +
Sbjct: 179 CDERRGLALRALLPRIPDDRLLLETDAPYLLPRDLHPKPASRRNEPCFLPHIVRQVAAWR 238

Query: 255 GVSAQYLAPILWQNSQMLF 273
           G  A++L   + +N++ +F
Sbjct: 239 GQDAEWLGRHVDENARRIF 257