Pairwise Alignments

Query, 207 a.a., SMP protein from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., YtjB family periplasmic protein from Dickeya dadantii 3937

 Score = 72.4 bits (176), Expect = 6e-18
 Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 6/193 (3%)

Query: 13  RVATVLAVAVMFFITIQNSVVISKGNERIQANQLETLTKVLITQAAMSAGSMIADQDQE- 71
           R A VL    +  + +Q +   S  ++  ++ Q+E L + L+ Q A     ++       
Sbjct: 12  RTAIVLICLALLVVLLQGASYFSLSHQMARSEQVEELARTLVRQVAFGLTPLMESNSDNS 71

Query: 72  -RLLALTNQLATDRLVFDASIYDSEGVLLAASESALSVREVLGLDTPLHTASIGRQQLVE 130
            R+     QL     + DA++Y  +G L+A +   + VR+ L LD      S    QLVE
Sbjct: 72  GRIEETLRQLTDHSRILDAALYQQDGTLVARAGEQIEVRDRLALDGS-RAGSYFNHQLVE 130

Query: 131 PVVHDGSLIGFVRITFETGKVTAISDHHYRKSDHNMYWMLLMSFVSGILL--TLLLQRRP 188
           PV      IGF+RIT +T  V A        + + +  M+LM+   GI+L  TLL  RR 
Sbjct: 131 PVNSKDGPIGFLRITLDT-HVLATEARQVDNTTNILRLMVLMALAIGIILARTLLQHRRS 189

Query: 189 KKPTGENLLLKQA 201
           +      LL   A
Sbjct: 190 RWQQSPYLLTANA 202