Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., DNA repair protein RadA from Xanthobacter sp. DMC5

 Score =  402 bits (1032), Expect = e-116
 Identities = 219/460 (47%), Positives = 293/460 (63%), Gaps = 17/460 (3%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISE-VRLAASPQVARNERLVGYAGALEA 59
           M +   +++C  CGA + RWQG+C ACG WN+ISE V +AAS   A+     G A  LE 
Sbjct: 1   MARRDTSFICQSCGAVYARWQGKCEACGGWNTISEEVAVAASVPAAQRSGRKGRAVVLE- 59

Query: 60  KVQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSG 119
           K++  A    +  PR  SG  ELDRV GGG VPG+ +LIGG+PG GKSTLL+Q    L+ 
Sbjct: 60  KLEGTA----KPAPRLVSGIGELDRVAGGGFVPGSILLIGGDPGIGKSTLLVQASAALAQ 115

Query: 120 Q-MPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKP-RIMVIDSI 177
           +    +YV+GEE++ QV +RA RLGL K  + + +ETN + I        P  ++VIDSI
Sbjct: 116 RGQRVVYVSGEEAVDQVRLRAQRLGLEKAEVGLAAETNAENIIATLSGGPPVHMVVIDSI 175

Query: 178 QVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDC 237
           Q M    V+S+PG+V QVR SA  L RYAKQ    V +VGHVTKDG +AGP+V+EH++D 
Sbjct: 176 QTMWSDSVESAPGTVTQVRTSAQLLVRYAKQTGACVILVGHVTKDGQIAGPRVVEHMVDA 235

Query: 238 SILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSS 297
               +GD   +FR LR+ KNRFG  +E+GVF MTG+G+ EV+NPS +FLS  +    G++
Sbjct: 236 VFSFEGDGGHQFRILRAQKNRFGPTDEIGVFEMTGRGLSEVANPSELFLSNRDAGAPGTA 295

Query: 298 VMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVF 357
           V    EGTRP+LVEIQALV  S L  PRR  VG + NRLS++LAVL    G+++   DV+
Sbjct: 296 VFAGMEGTRPVLVEIQALVAPSSLGTPRRAVVGWDPNRLSMVLAVLDARCGVRLGGHDVY 355

Query: 358 VNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEA 417
           +NV GG+K+ E +ADLA+  AL+SS    PLP D V FGE  L G +RPV   Q RL EA
Sbjct: 356 LNVAGGLKIGEPAADLAVAAALVSSLTGAPLPADAVHFGEASLTGAVRPVSQAQARLKEA 415

Query: 418 FKHGFKKAIVPIANMPKGGIEGM----QIHGVKKLSDAIA 453
            K GF  A++     P GG++G+     +  V  L++ +A
Sbjct: 416 AKLGFASAVI-----PSGGLDGLDPPVSVRPVSSLAELVA 450