Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., DNA repair protein RadA from Variovorax sp. SCN45

 Score =  463 bits (1192), Expect = e-135
 Identities = 246/461 (53%), Positives = 327/461 (70%), Gaps = 13/461 (2%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERL----VGYAGA 56
           M K K  +VC+ECG   P+W G+C +CG+WN++ E    A+     N R        AGA
Sbjct: 1   MAKDKTTFVCSECGGTSPKWLGKCPSCGAWNTLIEQAAGAAGGGPANNRFGTQFASLAGA 60

Query: 57  LEAKVQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCL 116
            E  + TL++I+  +V R  +G  ELDRVLGGGIV G   LIGG+PG GKSTLLLQ +  
Sbjct: 61  SE--LATLSEIEATDVARTPTGLDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVDA 118

Query: 117 L--SGQMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVI 174
           L  +GQ   LYVTGEES  QVA+R+ RLGL    +++L+E  +++I    +  +P I VI
Sbjct: 119 LQRAGQN-ALYVTGEESGSQVALRSKRLGLDHSQVQVLAEIQLEKIIATLDATRPAIAVI 177

Query: 175 DSIQVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHI 234
           DSIQ ++   + S+PGSVAQVRE A  LTR+AK +  AV +VGHVTK+G LAGP+VLEH+
Sbjct: 178 DSIQTVYSDQLTSAPGSVAQVRECAAHLTRFAKTSGTAVVLVGHVTKEGALAGPRVLEHM 237

Query: 235 IDCSILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATS 294
           +D  +  +GDT S FR +R+ KNRFGAVNE+GVFAMT +G++ V+NPSAIFLS+  E   
Sbjct: 238 VDTVLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVTNPSAIFLSQHAEPVP 297

Query: 295 GSSVMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQ 354
           GS V+V  EGTRP+LVEIQALVD     +PRR++VGL+++RL++LLAVLH+H G+   DQ
Sbjct: 298 GSVVLVTLEGTRPMLVEIQALVDNGG-PSPRRLSVGLDRDRLAMLLAVLHRHAGVACMDQ 356

Query: 355 DVFVNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERL 414
           DVFVN VGGV+++E +ADLA+++A+ SS R +P+PK  + FGEVGLAGE+RP P GQERL
Sbjct: 357 DVFVNAVGGVRISEPAADLAVMLAITSSLRGKPMPKGFIAFGEVGLAGEVRPAPRGQERL 416

Query: 415 NEAFKHGFKKAIVPIANMPKGG---IEGMQIHGVKKLSDAI 452
            EA K GF  A+VP AN P+ G   IEG+ IH V ++ +A+
Sbjct: 417 REAAKLGFSVAVVPKANAPRKGTKEIEGLTIHAVDRIEEAM 457