Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., DNA replication and repair protein RadA from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  565 bits (1457), Expect = e-166
 Identities = 276/460 (60%), Positives = 361/460 (78%), Gaps = 8/460 (1%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRL---AASPQVARNERLVGYAGAL 57
           M KAKR Y C ECGA FP+W GQC+ CG+WN++ E  +   AA+P   R     G+ G+ 
Sbjct: 1   MAKAKRLYGCTECGATFPKWAGQCSECGAWNTLVETMIESGAAAPPTGRT----GWTGS- 55

Query: 58  EAKVQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLL 117
           +A+++TLA++ ++E+PRF++   ELDRVLGGG+V G+ +LIGG+PG GKST+LLQT+C +
Sbjct: 56  QAQIRTLAEVSVEEIPRFSTNSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNI 115

Query: 118 SGQMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSI 177
           + +MP LYVTGEES QQVAMRA RLGLP+  L++++ET ++ I   A+ EKP++MVIDSI
Sbjct: 116 AQRMPALYVTGEESQQQVAMRARRLGLPQDKLRVMTETCIETIIATAKVEKPKVMVIDSI 175

Query: 178 QVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDC 237
           Q +    +QS+PG V+QVRESA  L RYAKQ+  A+F+VGHVTK+G LAGP+VLEH++D 
Sbjct: 176 QTIFTEQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDT 235

Query: 238 SILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSS 297
            +  +G++D R R LR+ KNRFGAVNELGVF MT +G++EVSNPSAIFL+R +E   GS 
Sbjct: 236 VLYFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSV 295

Query: 298 VMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVF 357
           VM  WEGTRP+LVE+QALVD S ++NPRRV +GL+QNRL++LLAVLH+HGG+   DQDVF
Sbjct: 296 VMATWEGTRPMLVEVQALVDDSHMSNPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVF 355

Query: 358 VNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEA 417
           +NVVGGVKV ET++DLAL+ A++SS R+RPLP D++VFGEVGL+GE+RPVPSGQERL EA
Sbjct: 356 LNVVGGVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEA 415

Query: 418 FKHGFKKAIVPIANMPKGGIEGMQIHGVKKLSDAIAAFDE 457
            KHGFK+AIVP  N PK    G+QI  V +L  A+ A  E
Sbjct: 416 AKHGFKRAIVPKGNAPKEAPPGLQIIAVTRLEQALDALFE 455