Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., DNA repair protein RadA from Sphingobium sp. HT1-2

 Score =  385 bits (989), Expect = e-111
 Identities = 209/457 (45%), Positives = 302/457 (66%), Gaps = 14/457 (3%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M KAKR +VC +CG    RWQGQC+ CG WNSI E   AA    +    L G   A+   
Sbjct: 1   MAKAKRKFVCQQCGTVSGRWQGQCDDCGEWNSIVEE--AAETVFSAKHDLQGGGRAI--- 55

Query: 61  VQTLADIDLQ-EVPRFTS-GFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLS 118
             TL  +D + E+P  TS G  E DR LGGGIVPG+A LIGG+PG GKSTLLLQ    ++
Sbjct: 56  --TLIGLDSKVELPSRTSTGIAEFDRALGGGIVPGSATLIGGDPGIGKSTLLLQAAARVA 113

Query: 119 GQMPTL-YVTGEESLQQVAMRASRLGLPKQHLKMLSETNV-DRICQIAEQEKPRIMVIDS 176
            +  T+ Y++GEE+  QV +RA RLGL    +++ S T+V D +  ++E   P +++IDS
Sbjct: 114 SRGLTVAYISGEEASDQVRLRAQRLGLGNAPVQLASATSVRDILTTLSEGVPPALLIIDS 173

Query: 177 IQVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIID 236
           IQ MH   ++ +PG+V+QVR S+  L ++AKQ   A+ +VGHVTKDG++AGP+VLEH++D
Sbjct: 174 IQTMHSDLIEGAPGTVSQVRASSQELIKFAKQRGTALILVGHVTKDGSIAGPRVLEHMVD 233

Query: 237 CSILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGS 296
             +  +G+   ++R LR+ KNRFG  +E+GVF+M  +G+ EV+NPSA+FL+  +E  +G+
Sbjct: 234 TVLAFEGERSHQYRILRAIKNRFGGTDEIGVFSMVAEGLEEVANPSALFLTNRDETVTGA 293

Query: 297 SVMVVWEGTRPLLVEIQAL-VDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQD 355
           +V    EGTRP+LVEIQAL V  S  A PRR  VG +  RL+++LAVL    GL  +  +
Sbjct: 294 TVFPALEGTRPVLVEIQALVVRLSSGATPRRAVVGWDSGRLAMILAVLEARCGLSFSTCE 353

Query: 356 VFVNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLN 415
           V++NV GG ++++ +ADLA+  AL+S+  +RP+P DVV+FGE+ L+ EIRPV     RL 
Sbjct: 354 VYLNVAGGYRLSDPAADLAVAAALMSALSERPVPADVVLFGEIALSSEIRPVSHTPLRLR 413

Query: 416 EAFKHGFKKAIVPIANMPKGGIEGMQIHGVKKLSDAI 452
           E+ K GF +A VP +     G++G+ + G + L+  +
Sbjct: 414 ESAKLGFNRAFVPASG--ADGVKGISVSGFRTLAQLV 448