Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

 Score =  563 bits (1450), Expect = e-165
 Identities = 274/457 (59%), Positives = 353/457 (77%), Gaps = 1/457 (0%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M KAKR Y C ECGA FP+W GQC  CG+WN++ E  + +    A +    G+ G  +A+
Sbjct: 1   MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSSGRAGWTGQ-QAQ 59

Query: 61  VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSGQ 120
           ++TLA++ ++E+PRFT+   ELDRVLGGG+V G+ +LIGG+PG GKST+LLQT+C ++  
Sbjct: 60  IKTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAVG 119

Query: 121 MPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQVM 180
           MP LYVTGEES QQVAMR+ RLGLP+  LK+++ET ++ I   A  EKPR+MVIDSIQ +
Sbjct: 120 MPALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETIIATARVEKPRVMVIDSIQTI 179

Query: 181 HVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSIL 240
               +QS+PG VAQVRES   L RYAKQ+  A+F+VGHVTK+G+LAGP+VLEH++D  + 
Sbjct: 180 FTEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVLY 239

Query: 241 LDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVMV 300
            +G++D R R LR+ KNRFGAVNELGVF MT +G++EVSNPSAIFL+R +E   GS VM 
Sbjct: 240 FEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSVVMA 299

Query: 301 VWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVNV 360
            WEGTRP+LVE+QALVD S LANPRRV +GL+QNRL++LLAVLH+HGG+   DQDVF+NV
Sbjct: 300 TWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNV 359

Query: 361 VGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFKH 420
           VGGVKV ET++DLALL A++SS R+RPL   ++VFGE+GL+GE+RPVPSGQERL EA KH
Sbjct: 360 VGGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLKEAAKH 419

Query: 421 GFKKAIVPIANMPKGGIEGMQIHGVKKLSDAIAAFDE 457
           GFK+AIVP  N PK    G+Q+  V +L  A+ A  E
Sbjct: 420 GFKRAIVPKGNAPKEAPAGLQVIAVTRLEQALDALFE 456