Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., DNA repair protein RadA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  468 bits (1203), Expect = e-136
 Identities = 249/457 (54%), Positives = 327/457 (71%), Gaps = 11/457 (2%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M K K  Y+C+ECG   P+W G+C  C +WN++ E  +A S   A+N      A A  A+
Sbjct: 1   MAKEKTQYICSECGGASPKWLGKCPHCNAWNTLVE-SVAESTAPAKNRFA---ALAKTAE 56

Query: 61  VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLL--S 118
           V TLADI+  +V R  +G  ELDRVLGGG+V G  +LIGG+PG GKSTLLLQ +  L  S
Sbjct: 57  VTTLADIEATDVQRTPTGHDELDRVLGGGVVEGGVVLIGGDPGIGKSTLLLQALDSLQRS 116

Query: 119 GQMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQ 178
           GQ  TLYVTGEES  QVA+R+ RLGL    + +L+E  +++I    E  +P I VIDSIQ
Sbjct: 117 GQK-TLYVTGEESGAQVALRSRRLGLDGSQVSVLAEIQLEKILATLESTRPAIAVIDSIQ 175

Query: 179 VMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCS 238
            ++   + S+PGSVAQVRE A  LTR AK +  A+ +VGHVTK+G LAGP+VLEH++D  
Sbjct: 176 TVYSEQLTSAPGSVAQVRECAAHLTRAAKASGTAIVLVGHVTKEGALAGPRVLEHMVDTV 235

Query: 239 ILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSV 298
           +  +GDT S FR +R+ KNRFGAVNE+GVFAMT +G++ VSNPSAIFLS+  E   GS V
Sbjct: 236 LYFEGDTHSSFRLIRAIKNRFGAVNEIGVFAMTEKGLKGVSNPSAIFLSQHSEPVPGSCV 295

Query: 299 MVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFV 358
           MV  EGTRP+LVEIQALVD S   +PRR++VGL+++RL++LLAVLH+H G+   DQDVFV
Sbjct: 296 MVTLEGTRPMLVEIQALVD-SGGPSPRRLSVGLDRDRLAMLLAVLHRHAGVACMDQDVFV 354

Query: 359 NVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAF 418
           N VGGV++ E +ADLA+++++ SS R +PLPK  + FGEVGLAGE+RP P GQ+RL EA 
Sbjct: 355 NAVGGVRINEPAADLAVMLSITSSLRGKPLPKGFLAFGEVGLAGEVRPAPRGQDRLKEAA 414

Query: 419 KHGFKKAIVPIANMPK---GGIEGMQIHGVKKLSDAI 452
           K GF  A+VP AN+P+      EG+ +HGV ++ +A+
Sbjct: 415 KLGFSVAVVPKANLPRKNDKAFEGLTVHGVDRIEEAM 451