Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., DNA repair protein RadA from Methylophilus sp. DMC18

 Score =  516 bits (1328), Expect = e-151
 Identities = 256/452 (56%), Positives = 334/452 (73%), Gaps = 6/452 (1%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M KAK  Y C ECGA  P+WQGQC +C +WN++ E      P+ A   R    A    A+
Sbjct: 1   MAKAKTQYTCTECGATEPKWQGQCPSCHAWNTLVET----VPEAATTSRFASLAPT--AQ 54

Query: 61  VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSGQ 120
           +Q LAD++ Q+V R  +G  E DRVLGGG+V G  +LIGG+PG GKSTLLLQT+C +S  
Sbjct: 55  LQKLADVEAQDVSRQATGITEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQTVCNVSQS 114

Query: 121 MPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQVM 180
           +   Y++GEES QQ+AMRA RLGL    + +L+E N+++I Q+ +Q +P ++VIDSIQ +
Sbjct: 115 LKAFYISGEESAQQIAMRAHRLGLDASQVDVLAEINLEKISQVLQQHQPDVVVIDSIQTV 174

Query: 181 HVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSIL 240
           +   +QS+PGSVAQVRE +  LTR AKQ  +++ +VGHVTK+G+LAGP+VLEHI+D  + 
Sbjct: 175 YSEALQSAPGSVAQVRECSAQLTRVAKQLGISMILVGHVTKEGSLAGPRVLEHIVDSVLY 234

Query: 241 LDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVMV 300
            +GD +S FR +R+ KNRFGAVNELGVFAMT +G+REVSNPSA+FLS  E    GS + V
Sbjct: 235 FEGDQNSSFRLIRAFKNRFGAVNELGVFAMTEKGLREVSNPSALFLSHHESPVPGSCITV 294

Query: 301 VWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVNV 360
             EGTRPLLVEIQALVD +   NP+R+ VGLEQNRL++LLAVLH+H G+   DQDVF+N 
Sbjct: 295 TQEGTRPLLVEIQALVDTAHAPNPKRLCVGLEQNRLAMLLAVLHRHAGVACYDQDVFINA 354

Query: 361 VGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFKH 420
           VGGVK++E + DLA+L+A++SS +++PLP  ++VFGEVGLAGE+RPV  GQERL EA K 
Sbjct: 355 VGGVKISEPAVDLAVLLAIVSSLKNKPLPNKLIVFGEVGLAGEVRPVQRGQERLKEAAKL 414

Query: 421 GFKKAIVPIANMPKGGIEGMQIHGVKKLSDAI 452
           GF  AI+P AN PKGGI GMQ+  V +L  AI
Sbjct: 415 GFTHAIIPKANAPKGGIAGMQVEAVDRLEHAI 446