Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., DNA repair protein RadA from Magnetospirillum magneticum AMB-1

 Score =  394 bits (1013), Expect = e-114
 Identities = 210/456 (46%), Positives = 297/456 (65%), Gaps = 15/456 (3%)

Query: 8   YVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAKVQTLA-D 66
           +VC ECGA   +W G+C ACG+WNSI+E       + AR E   G       +++ +  +
Sbjct: 9   FVCQECGAVTRKWAGKCEACGAWNSITE-------EAAREEVPKGLTAGKGKRIEFVGLE 61

Query: 67  IDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSGQMPTLYV 126
                + R+ +G  ELDRV GGG+VPG+ +L+GG+PG GKSTLLLQ    LS Q+   Y+
Sbjct: 62  GSAAPLARWLTGIGELDRVCGGGLVPGSCLLVGGDPGIGKSTLLLQATARLSSQISVAYI 121

Query: 127 TGEESLQQVAMRASRLGLPKQHLKMLSETNV-DRICQIAEQEKPRIMVIDSIQVMHVADV 185
           +GEE++ QV MRA+RLG  K  + + S  ++ D I  + + + P+++VIDSIQ ++  ++
Sbjct: 122 SGEEAVDQVRMRAARLGYAKATVALASAGSLRDIIASLDQPDAPQVVVIDSIQTVYADNI 181

Query: 186 QSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSILLDGDT 245
           +S+PG+V+QVR  A  L R AK+    +F+VGHVTK+GT+AGP+VLEH++D  +  +GD 
Sbjct: 182 ESAPGTVSQVRACAAELIRLAKRRGFVLFLVGHVTKEGTIAGPRVLEHMVDTVLYFEGDR 241

Query: 246 DSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVMVVWEGT 305
             +FR LR+ KNRFGA +E+GVF MT  G+ EV+NPSA+FL+      SGS V    EGT
Sbjct: 242 GHQFRILRAVKNRFGATDEIGVFEMTEGGLSEVANPSALFLAERRGNVSGSCVFAGMEGT 301

Query: 306 RPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVNVVGGVK 365
           RP+LVEIQALV  S L++PRR  VG + NRLS++LAVL    GL ++  DV++NV GG++
Sbjct: 302 RPMLVEIQALVAPSSLSSPRRAVVGWDTNRLSMVLAVLDARCGLALSGNDVYLNVAGGLR 361

Query: 366 VTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFKHGFKKA 425
           + E +ADLA+  AL+SS  D P+P D+VVFGE+GL+GE+R V     RL EA K GF +A
Sbjct: 362 IAEPAADLAVAAALVSSASDVPVPADMVVFGEIGLSGEVRAVAQADTRLKEAAKLGFAQA 421

Query: 426 IVPIANMPK--GGIEG----MQIHGVKKLSDAIAAF 455
           +VP        GG  G    + I  +  L D +  F
Sbjct: 422 LVPARPRKDKGGGAAGAGSPLAIRSIGHLQDVLGLF 457