Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., DNA replication and repair protein RadA from Kangiella aquimarina DSM 16071

 Score =  528 bits (1360), Expect = e-154
 Identities = 257/453 (56%), Positives = 340/453 (75%), Gaps = 2/453 (0%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNS-ISEVRLAASPQVARNERLVGYAGALEA 59
           M K K  YVC ECG++ P+W GQC AC +WNS + +V        A++ R  GYAG  ++
Sbjct: 1   MGKVKTIYVCQECGSETPQWAGQCGACKAWNSMVEQVDAKKVSSTAKSSRFTGYAGQ-DS 59

Query: 60  KVQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSG 119
           KV  +  +DL E+PR +SG  ELDRVLGGG+VPG+ +L+GG+PG GKST+LLQ++C +S 
Sbjct: 60  KVVKMDKVDLSELPRMSSGLSELDRVLGGGLVPGSVVLMGGDPGIGKSTILLQSLCKISE 119

Query: 120 QMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQV 179
               LYVTGEESLQQV MRA RLGL      +L+ET V++I   A  +KP++MV+DSIQ 
Sbjct: 120 TDSVLYVTGEESLQQVTMRAQRLGLATGDFSLLTETQVEQITTQALMQKPKVMVVDSIQT 179

Query: 180 MHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSI 239
           ++   +QS+PG VAQVRESA  L R+AKQ  + + +VGHVTKDG LAGP+VLEH++D  +
Sbjct: 180 IYTEMLQSAPGGVAQVRESAAQLVRFAKQTGITLLVVGHVTKDGALAGPRVLEHMVDAVL 239

Query: 240 LLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVM 299
             +G+ D R R LR+ KNRFGAVNELGVFAMT +G+++V NPSAIFLS+ ++  +GS+VM
Sbjct: 240 YFEGERDGRLRLLRAVKNRFGAVNELGVFAMTDEGLKQVKNPSAIFLSKYQDPVAGSAVM 299

Query: 300 VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN 359
             WEGTRP+LVEIQALVD S    PRR+AVGL+  R+++LLAVL++H G+   DQDVF N
Sbjct: 300 ATWEGTRPMLVEIQALVDTSHAPQPRRIAVGLDHQRIAMLLAVLNRHAGIATYDQDVFAN 359

Query: 360 VVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK 419
           VVGGV+V ETS+DLAL+ +++SS R+RPL +  V+FGE+GLAGEIRPVP+GQERL EA K
Sbjct: 360 VVGGVRVMETSSDLALVASIISSLRNRPLEEHTVIFGEIGLAGEIRPVPNGQERLKEAAK 419

Query: 420 HGFKKAIVPIANMPKGGIEGMQIHGVKKLSDAI 452
           HGFK+AIVP  N P+   +GM++ GV +++  I
Sbjct: 420 HGFKRAIVPEGNKPQKPFDGMEVIGVSRMAQFI 452