Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., DNA repair protein RadA from Caulobacter crescentus NA1000 Δfur

 Score =  380 bits (975), Expect = e-110
 Identities = 204/453 (45%), Positives = 290/453 (64%), Gaps = 6/453 (1%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M +    Y C  CGA   +W GQC+AC SWN++ E  ++A P  A +         L+  
Sbjct: 1   MARDGAVYACQSCGAVQTKWSGQCSACQSWNTLVE-EVSAKPPGALSATKATRVRGLQF- 58

Query: 61  VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSGQ 120
             T  + +    PR  +G  E DRV GGG+VPG+A+LIGG+PG GKSTLLLQ     + +
Sbjct: 59  --TGLESETAPPPRILTGVDEFDRVCGGGVVPGSALLIGGDPGVGKSTLLLQVCASAAAR 116

Query: 121 -MPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQV 179
            +   Y++GEE+++Q+  RA R+GL K ++ + +ET +  I    +++   ++VIDSIQ 
Sbjct: 117 GVSCAYISGEEAVEQIRGRADRMGLAKANVSLAAETALRDILDGLKRDNFDLVVIDSIQT 176

Query: 180 MHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSI 239
           M     ++ PG+V QVR  AT L R AK+  VA+ +VGHVTKDG +AGP+V+EH++D  +
Sbjct: 177 MWSDAHEAGPGTVTQVRACATELVRLAKKKGVAILLVGHVTKDGQIAGPRVVEHLVDAVL 236

Query: 240 LLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVM 299
             +G+    FR LR  KNRFGA +E+GVF M   G+REV NPSA+FL+ G E  +G++V 
Sbjct: 237 SFEGERGYPFRILRGAKNRFGATDEIGVFEMGDVGLREVKNPSALFLNEGGERAAGAAVF 296

Query: 300 VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN 359
              EG+RP+LVE QALV  S    PRR  VG +  RL+++LAVL    GL   D+DV++N
Sbjct: 297 AGIEGSRPVLVEFQALVAPSAYGTPRRAVVGWDSGRLAMVLAVLEARCGLGFGDKDVYLN 356

Query: 360 VVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK 419
           V GG+++TE +ADLA   AL SS  D  LP+D VVFGE+ L+GE+RPV   + RL EA K
Sbjct: 357 VAGGLRITEPAADLAAAAALASSALDVALPQDCVVFGELSLSGEVRPVSRMETRLKEAAK 416

Query: 420 HGFKKAIVPIANMPKGGIEGMQIHGVKKLSDAI 452
            GF +A+ P+A +P+GG   + + GV +L+DA+
Sbjct: 417 LGFGRALGPLAGLPEGG-GALPVAGVARLTDAV 448