Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., DNA repair protein RadA from Bacteroides stercoris CC31F

 Score =  367 bits (943), Expect = e-106
 Identities = 193/456 (42%), Positives = 293/456 (64%), Gaps = 6/456 (1%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M K K  YVC+ CG + P+W G+C +CG+WN+  E  +     V  N+R V      +AK
Sbjct: 1   MAKEKTVYVCSNCGQESPKWVGKCPSCGAWNTYVE-EIVRKETV--NKRPVSGLETAKAK 57

Query: 61  VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSGQ 120
             TL +I   + PR      EL+RVLGGG+V G+ +LIGG PG GKSTL+LQT+  +  +
Sbjct: 58  PVTLDEIAADDEPRIDLHDAELNRVLGGGLVQGSLVLIGGEPGIGKSTLVLQTILRIP-E 116

Query: 121 MPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQVM 180
              LY++GEES +Q+ +RA RL        ++ ET++++I    +  +P +++IDSIQ +
Sbjct: 117 KRILYISGEESARQLKLRADRLSGTSADCLIVCETSLEQIYVHIKNTRPDLVIIDSIQTI 176

Query: 181 HVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSIL 240
               ++SSPGS+AQVRE + ++ R+AK+ + AV ++GH+ K+G++AGPKVLEHI+D  + 
Sbjct: 177 STEKLESSPGSIAQVRECSASILRFAKETHTAVILIGHINKEGSIAGPKVLEHIVDTVLQ 236

Query: 241 LDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVMV 300
            +GD    +R LRS KNRFG+  ELG++ M   G+R+VSNPS + LS+  E  SG ++  
Sbjct: 237 FEGDQHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVSNPSELLLSQDHEGMSGIAIAS 296

Query: 301 VWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVNV 360
             EG RP L+E QALV  +   NP+R A G +  R+++LLAVL K  G ++A +DVF+N+
Sbjct: 297 AIEGIRPFLIETQALVSSAVYGNPQRSATGFDIRRMNMLLAVLEKRVGFKLAQKDVFLNI 356

Query: 361 VGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFKH 420
            GG+KV + + DLA++ A+LSS  D  +  ++ + GE+GL+GEIRPV   ++R+ EA K 
Sbjct: 357 AGGLKVNDPAIDLAVISAILSSNMDTAIEPEICMAGEIGLSGEIRPVNRIEQRIGEAEKL 416

Query: 421 GFKKAIVPIANMPKGGIEGMQIH--GVKKLSDAIAA 454
           GFK+ I+P  N+       ++I    V+K+ +A  A
Sbjct: 417 GFKRFILPKYNLQGLNASKLKIELIPVRKVEEAFRA 452