Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., DNA repair protein from Agrobacterium fabrum C58

 Score =  369 bits (948), Expect = e-107
 Identities = 197/448 (43%), Positives = 280/448 (62%), Gaps = 24/448 (5%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M KAK  +VC  CG    RW G+C  CG WN+I E            E  +G  G+   K
Sbjct: 1   MAKAKTQFVCQNCGTVHNRWAGKCEGCGEWNTIVE------------EDPMGGIGSGPGK 48

Query: 61  VQ------TLADI--DLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQ 112
           V       TL  +  +++E PR  +G  ELDR  GGG V G+A+LIGG+PG GKSTLL+Q
Sbjct: 49  VPKKGRPVTLTSLSGEIEEAPRIPTGISELDRATGGGFVRGSAVLIGGDPGIGKSTLLMQ 108

Query: 113 TMCLLSGQ-MPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNV-DRICQIAEQEKPR 170
               LS +    +YV+GEE++ QV +RA RLG     + + +ETNV D +  ++E ++P 
Sbjct: 109 AAAALSRRGHRVIYVSGEEAVAQVRLRAQRLGSADTDVLLAAETNVEDILATVSEGKRPD 168

Query: 171 IMVIDSIQVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKV 230
           +++IDSIQ +      S+PG+V QVR    A+ R+AKQ    + +VGHVTK+G +AGP+V
Sbjct: 169 LIIIDSIQTLWSDTADSAPGTVTQVRTGVQAMIRFAKQTGATMVLVGHVTKEGQIAGPRV 228

Query: 231 LEHIIDCSILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGE 290
           +EH++D  +  +GD    +R LR+ KNRFG  +E+GVF M+  G+REVSNPS +FL    
Sbjct: 229 VEHMVDAVLYFEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDGGLREVSNPSELFLGERN 288

Query: 291 EATSGSSVMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQ 350
           E + G++V    EGTRP+LVE+QALV  + L  PRR  VG + +RL+++LAVL  H G++
Sbjct: 289 EKSPGAAVFAGIEGTRPVLVEVQALVAATSLGTPRRAVVGWDSSRLAMILAVLEAHCGVK 348

Query: 351 MADQDVFVNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSG 410
           +   DV++NV GG +++E +AD+A+  AL+SS     LP D V FGE+ L+G +RPV   
Sbjct: 349 LGQHDVYLNVAGGYRISEPAADMAIASALVSSLAGLALPADCVYFGEISLSGAVRPVAHT 408

Query: 411 QERLNEAFKHGFKKAIVP--IANMPKGG 436
            +RL EA K GF  A++P   A +PK G
Sbjct: 409 VQRLKEAEKLGFSAALLPSGSAELPKAG 436