Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

 Score =  110 bits (275), Expect = 1e-28
 Identities = 112/462 (24%), Positives = 198/462 (42%), Gaps = 37/462 (8%)

Query: 22  MLLRWAKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNC 81
           ++L+ A+  P+       I   +   TYA  A+++ R+   LRA+G  PG +V L  +N 
Sbjct: 6   LILQTARRLPDN----PAITDTYGTLTYAAFAERSARIAGGLRAMGLKPGARVVLFMENT 61

Query: 82  AEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKILIV--GKLDDNKATAHVLAE 139
             +F C L   +    +VP+        +      +E++ L    G  +   A +  LA+
Sbjct: 62  GAFFECLLGCWIAGLCAVPVNAKLHPREVIGIAADAEAEALFTTPGLSEALAAESDALAQ 121

Query: 140 RPNLISISLPYPSAAKCQYEFQTLIKQHQPSEERPTHFDEKLMSIVYTSGTSGQPKGAML 199
              L + +  Y      +     +  +    EER   F        YTSGT+G+PKGAML
Sbjct: 122 LAVLSAGTEAYARLVAAE----PIACEDAAPEERAWLF--------YTSGTTGKPKGAML 169

Query: 200 TYGAFTWSAQQLINHIG-IEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPE-SLDT 257
           ++      +    + +  I+ +D   +  P++H    +Y     + G      P   ++ 
Sbjct: 170 SHRNLLAMSLAYYSDVDPIDTDDTHIACAPVSH-GAGLYALPFLMKGAHQVVLPGFDVEE 228

Query: 258 FIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQKKLNILLKI-----PFVNSLIKRKLAD 312
            +E +  +      + P + T          P   L+ L  I     P   + +K+ L  
Sbjct: 229 VLEAIARYSKVTIFAAPTMLTRMVNH--PATPSADLSNLKTIYYGGAPMYVADLKQALRV 286

Query: 313 GLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNYPFRADKIGTVG 372
            +G    ++ G G +P++  LL     VG +   A    +     +  +P    ++  V 
Sbjct: 287 -IGPKLCQIFGQGESPMTITLLPKSLHVGADGAPA----DDAVLGSCGFPRSGQEVRVVD 341

Query: 373 NAGPGIELKIAEDEEILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTI 432
             G   +L   E  E++ RS  +  GY+ N   TA +  D GWL+TGD+GSLD+ GYLT+
Sbjct: 342 QDGQ--DLPPGEVGEVITRSDCVMEGYWNNPAGTAAALRD-GWLYTGDVGSLDARGYLTL 398

Query: 433 QGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIGSGLP 474
           + R KD    + G  + P  +E+ L ++  V  + +IG+  P
Sbjct: 399 RDRSKDLI-ISGGSNIYPREVEEVLLQHESVLEVSVIGAPHP 439