Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., Long-chain-fatty-acid--CoA ligase FadD15 from Xanthobacter sp. DMC5

 Score =  192 bits (487), Expect = 4e-53
 Identities = 157/545 (28%), Positives = 255/545 (46%), Gaps = 68/545 (12%)

Query: 63  LRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKIL 122
           LRALG   G  VA++S+N  EW +  L   L   ++V ++PT+ +  + Y L H+E++I+
Sbjct: 55  LRALGLPEGGHVAVLSENRIEWVLTQLGAGLLGAVTVGVYPTSPANEVAYVLGHAEAEIV 114

Query: 123 IVGKLDDNKATAHVLAERPNLISISLPYPSAAKCQ-----YEFQTLIKQ---HQPSEE-- 172
           +    +         AE P L  I +      +         F  +I+    H+ ++   
Sbjct: 115 VCEDQEQVDKVLERRAELPKLRRIVVVEKKGLRTYAGGEVIAFDAMIEMGAAHRAAQPWI 174

Query: 173 ------RPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFSY 226
                 R +  D  LM  +YTSG++G+PKGAMLTY      A  L   +G++E     SY
Sbjct: 175 IEEALARQSLSDVALM--IYTSGSTGKPKGAMLTYRNLRAEAIALAERLGLDETTTHVSY 232

Query: 227 LPLAHITERVYIFGSSIIGGVLTAFPESLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQD 286
           LPL H+ E++    + I  G    F ES+ T  ED++   P++F+ VPR+W      I  
Sbjct: 233 LPLCHVAEQMLTTMAPIYLGSQVNFGESIRTIQEDLREVAPSMFLGVPRIWEKLAASITI 292

Query: 287 K------LPQKKLNILLKI--PFVNS------------------LIKRKLADGLGLDQAR 320
           K      L +   + L+K   PF                     L  R L + +GL +A+
Sbjct: 293 KMMEAGGLRRALYDRLVKACEPFAEKHPSARTLKERALFFVAYLLYFRALQNFIGLRRAK 352

Query: 321 VLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNYPFRADKI--GTVGNAGPGI 378
           V   G+AP+SP ++ ++R++G+ + E +G TE+    T     R D +  G VG A  G+
Sbjct: 353 VAMTGAAPISPNIVRFFRTLGVPLVEVYGATETTGMCTGQ---RLDDLRPGCVGPAAEGV 409

Query: 379 ELKIAEDEEILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKD 438
           E+K+    E+LV+   +FAGYY+++ ATA +   DGWLHTGD+  +  +  + I  R KD
Sbjct: 410 EVKLGPHNELLVKGDLVFAGYYRSEEATAAALR-DGWLHTGDVVEMVGD-QVKIVDRLKD 467

Query: 439 TFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIGS----------------GLPAPILLAVP 482
              TA GK ++P  IE        ++   +IG                 G  A       
Sbjct: 468 IMITAGGKNLSPSEIENVAKSSVFIKECIVIGEARKYVSALIQIDFETVGKWAEEKSLAY 527

Query: 483 HNFPHF-DRARYERTTQKVIARINSELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHV 541
            NF +  +  +     +  +A+ N+EL     I+   ++      D+  +T T+KI+R  
Sbjct: 528 TNFRNLVENPQVRALIEGEVAKANAELAQVSHIRRFHLLTKELDHDDDEVTATMKIRRSN 587

Query: 542 LEKKY 546
           ++KKY
Sbjct: 588 IQKKY 592