Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., AMP-binding protein from Pseudomonas simiae WCS417

 Score =  406 bits (1044), Expect = e-117
 Identities = 214/553 (38%), Positives = 335/553 (60%), Gaps = 7/553 (1%)

Query: 13  PCALPPPNEMLLRWAKERPNEVYLKQIINRQFVE-FTYAEVADKALRLVSALRALGADPG 71
           P A   P ++        P + +L Q +    V+  T+ +V  +A    + LRA     G
Sbjct: 2   PVAFRLPLQVFFEREARHPRQTFLVQPVGDGEVQSLTWGDVGHQARCAANWLRARELPQG 61

Query: 72  DKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKILIVGKLDDNK 131
             +ALISKNCA W I DLA+ +  ++SVP++P   ++++ + L HSE+ ++++GKLDD  
Sbjct: 62  SHIALISKNCAHWIIADLAIWMAGHVSVPLYPNLTADSVAHVLTHSEAALVLIGKLDDWP 121

Query: 132 ATAHVLAERPNLISISLPYPSAAKCQYEFQTLIKQHQPSEERPTHFDEKLMSIVYTSGTS 191
           A A  + +  ++ +ISLP   + +  + +  L +   P ++ P      L +I+YTSGT+
Sbjct: 122 AMAPGVPK--DVPTISLPLCPSGEFDFSWADL-QASSPIQDDPAPAASDLATIIYTSGTT 178

Query: 192 GQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAF 251
           G PKG M ++GA  ++A +     G+ E DRL SYLPL H+ ER+++  +SI  G    F
Sbjct: 179 GLPKGVMHSFGALGFAATRGTALFGLGEGDRLLSYLPLCHVAERMFVEMASIYTGQTVFF 238

Query: 252 PESLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQKKLNILLKIPFVNSLIKRKLA 311
            ESL+TF+ D++  RPT    VPR+WT FQ  +  K+P K+L+ LL++PF+   +  K+ 
Sbjct: 239 AESLETFLVDLRRARPTALFGVPRIWTKFQMGVYAKVPAKRLDALLRLPFIGKRVGHKVL 298

Query: 312 DGLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNYPFRADKIGTV 371
            GLGLD  R+   G+APV  ALL WYR +GL++ E +GMTES  YS +  P +   +G +
Sbjct: 299 AGLGLDALRIALSGAAPVPEALLRWYRRLGLDVLEVYGMTESCGYSHVCRPGQ-QTLGWI 357

Query: 372 GNAGPGIELKIAEDEEILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLT 431
           G   PG+E++I    E+ VRS     GYYK+   TAE+   DG+L TGD G  D+EG L 
Sbjct: 358 GLPCPGVEVRIDPAGEVQVRSGATMLGYYKDPQKTAETITADGFLRTGDKGEQDTEGRLR 417

Query: 432 IQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIGSGLPAPILLAVPHNFPHFDRA 491
           + GR K+ FKT+KGK+VAP PIE +L E++R+E +C++G GL API L V       D  
Sbjct: 418 LTGRLKEIFKTSKGKYVAPAPIENRLAEHARIEQVCVVGDGLSAPIGLCVLSAVEQ-DPQ 476

Query: 492 RYERTTQKVIARINSELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKYHDVGQ 551
               + ++ + ++N  L+ HE+++ ++++KD W+++NG LTPTLKIKR+ +E  Y +  Q
Sbjct: 477 ALRSSLERWLVQVNQTLDKHERLRQLVVVKDSWAVENGFLTPTLKIKRNAIESTYGEYFQ 536

Query: 552 NW-PKGQLVVWEE 563
            W  + + V+W++
Sbjct: 537 RWSERSETVLWQD 549