Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  108 bits (271), Expect = 4e-28
 Identities = 112/447 (25%), Positives = 190/447 (42%), Gaps = 57/447 (12%)

Query: 49  YAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSE 108
           +A   D+  RL + LR LG  PGD+V ++S N   +         G  +  P+      +
Sbjct: 29  FAGFTDRVARLGAVLRQLGMRPGDRVGMMSLNSHRFVEYFFGTWWGGGVINPVNIRWNPK 88

Query: 109 TIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLIS-----ISLPYPSAAKCQYEFQTL 163
            + Y L+  +++IL+V   DD    A + AE   L S     +     +  +    ++ L
Sbjct: 89  EVAYSLDDCDTRILLV---DD--VFAPMAAELRGLSSSLRTVVYCGDGAVPEGMVGYEAL 143

Query: 164 IKQHQPSEERPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEEND-R 222
           +    P+E+ P H  ++L +++YT GT+GQPKG MLT+G+   +A   +  +  +  D  
Sbjct: 144 LAATDPAEDAP-HDSDELAAVMYTGGTTGQPKGVMLTHGSLCINALGTVAALPRDTQDAA 202

Query: 223 LFSYLPLAHITERVYIFGSSIIGGVLTAFPESLDTFIEDVKMHRPTLFISVPRLWTLFQQ 282
                P+ H+       G  +          +L + +  V +H   +F  +  L TL   
Sbjct: 203 AIVAAPMFHVA------GCGV----------ALQSLMRLVPVHVVPVFDELAVLRTLQSA 246

Query: 283 RIQDKLPQKKLNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPALLEWYRSV-- 340
           RI +        + L    +  +I+        L   R+L  G+AP+  ALL+       
Sbjct: 247 RITE--------MFLVPTMIKRVIEHPRFAEFDLSSLRLLSYGAAPIDAALLDQAMRAFP 298

Query: 341 GLNITEAWGMTESFAYST-------LNYPFRADKIGTVGNAGPGIELKIAEDE------- 386
           G    + +GMTE     T          P R   + + G   P  EL+I + +       
Sbjct: 299 GTAFAQVYGMTELSPVVTALPSHCHAPGPDRERLLRSAGTPIPIAELRIVDGDDNEVPFG 358

Query: 387 ---EILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTA 443
              EI+ R   +  GY+ N     E+    GW+HTGD G +D EG++ +  R KD    +
Sbjct: 359 QVGEIVARGPMVMKGYW-NKPKETEAALRGGWMHTGDGGYMDEEGFVFVVDRMKDMI-VS 416

Query: 444 KGKFVAPVPIEKKLFEYSRVEMMCLIG 470
            G+ V    +E  + +  +V M  +IG
Sbjct: 417 GGENVYSAEVENAIAQLPQVLMSAVIG 443