Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

 Score =  117 bits (292), Expect = 1e-30
 Identities = 131/520 (25%), Positives = 211/520 (40%), Gaps = 75/520 (14%)

Query: 48  TYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGS 107
           T+ ++ + A R  + LR  GA PGD++A I  N  ++ I    +     + VPI P   +
Sbjct: 67  TFGQLDEMANRCANMLRNEGAKPGDRIATICSNSIDFIIVIFGLHKAGLVWVPINPLIAA 126

Query: 108 ETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISISLPYPSAAKCQYEFQTLIKQH 167
           +   Y L H+E+  +I        A  H+    P     S P  +  +    F T +   
Sbjct: 127 DDRAYILNHTEASFVI--------ADEHIQNVIPEGAGGSPPVLALGEA---FDTRLSSA 175

Query: 168 QPSE-ERPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFSY 226
            P E + P H +  L  I+YTSGT+ +PKG M    A   +    I    +   DR+   
Sbjct: 176 SPKEPDLPIH-ERDLAMIMYTSGTTSRPKGVMHCNLAVYATVMCNIGEWMVTRKDRILIV 234

Query: 227 LPLAHITERVYIFGSSIIGGVLTAF-----PESLDTFIEDVKMHRPTLFISVPRLWTLFQ 281
           LPL H++    +F + +  G          P  +   IED K+   + F+ +P ++    
Sbjct: 235 LPLFHVSAHC-LFTTFMAAGATVVLHNGFDPGQVAAAIEDEKV---SFFVGLPMMYAAVM 290

Query: 282 Q---RIQDKLPQKKLNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPALLEWYR 338
               R+       +  I    P    L++R L++           C +  +S    E Y 
Sbjct: 291 DHPIRMTTDFSSLRYCIYAMAPMPGPLLRRLLSE----------FCPTFVLSSGQTEMYP 340

Query: 339 SVGLNITEAWGMTESFAY---STLNYPFRADKIGTVGNAGPGIELKIAEDEEILVRSKGL 395
           S  +   E   + E   +   S +N     D  GT+        L   +  EI+ R   +
Sbjct: 341 STAMLRPEQQLLKEGNYWGEPSIVNDMAIMDDDGTL--------LPPGQVGEIVHRGPNV 392

Query: 396 FAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEK 455
             GYYK++ ATA S    GW HTGD+G +D +G L    R KD  K+  G+ VA V +E+
Sbjct: 393 MLGYYKDEAATAHS-RRFGWHHTGDLGVIDEDGQLLFVDRLKDIIKSG-GENVASVKVEQ 450

Query: 456 KLFEYSRVEMMCLIGSGLPAPILLAVPHNFPHFDRA---------RYERTTQKVIARINS 506
            L ++  +     IG          VPH  P +  A               Q+++    +
Sbjct: 451 VLLQHPSIGNAAAIG----------VPH--PRWQEAVVAVVMLKPGSTAGAQEILDHCRA 498

Query: 507 ELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKY 546
            L  HE  K V        +D+  LT T K+++  L  ++
Sbjct: 499 ALAPHEVPKAVQF------VDDLPLTATSKLRKVELRDRF 532