Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

 Score =  214 bits (544), Expect = 1e-59
 Identities = 168/577 (29%), Positives = 273/577 (47%), Gaps = 55/577 (9%)

Query: 22  MLLRWAKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNC 81
           M    AKE+ +  +L +     +   ++AEVA +   + + L+A G  PGD V L+S+N 
Sbjct: 13  MFFARAKEKGDAPFLWRKTQGTWQSLSWAEVARQVAAMAAGLKAEGLKPGDPVMLVSENR 72

Query: 82  AEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAERP 141
            E+ I DLA+M    I+VP + T  +    + L  S ++ +IV       AT  + A   
Sbjct: 73  PEFCIADLAIMAAGCITVPTYTTNTTRDHQHILTDSGARAVIVSTA--KLATTLMPAVLR 130

Query: 142 NLISISLPYPSAAKCQYEF-----QTLIKQHQPSEER----PTHFDEKLMSIVYTSGTSG 192
           + +S+ +P       Q  +       LI  H    +      T        I+YTSGT G
Sbjct: 131 SQVSLVIPMEPIRGAQGNYTCRLWSDLIAAHPADVDACALAQTAARSDQACIIYTSGTGG 190

Query: 193 QPKGAMLTYGAFTWSAQQLINHIGIEE---NDRLF-SYLPLAHITERVY-IFGSSIIGGV 247
            P+G M  +GA   + +     + +E+    D +F S+LPL+H  E     F   ++GG 
Sbjct: 191 APRGVMQHHGAILANVEGA-GQVVLEDFGWGDEVFLSFLPLSHAYEHSGGQFLPMLLGGQ 249

Query: 248 LTAFPESLDTFIEDVKMHRPTLFISVPRLWTLFQQRI------QDKLPQKKLNILLKIPF 301
           +  + E L+    +++  RPT+ + VPRL+ + + RI      Q K P   LN  L+I  
Sbjct: 250 IY-YAEGLEKLASNIEEARPTIMVVVPRLFEVLRTRIIKSIEKQGKFPTYLLNQALRIAA 308

Query: 302 -------------VNSLIKRKLADGLGL---DQARVLGCGSAPVSPALLEWYRSVGLNIT 345
                        + +L+ R L   +      + + L  G AP++P +  ++ ++GL + 
Sbjct: 309 KEQQGKSSIVDLPMKALLSRTLTPKIRARFGGRMKALVSGGAPLNPDVGLFFEAMGLMLL 368

Query: 346 EAWGMTESFAYSTLNYPFRADKIGTVGNAGPGIELKIAEDEEILVRSKGLFAGYYKNDTA 405
           + +G TE+    + N P     + TVG    G+E+KIAED EILVR + +  GY++N   
Sbjct: 369 QGYGQTEAGPVISCNRPAAGIAMDTVGPPLDGVEVKIAEDGEILVRGELVMHGYWRNPAE 428

Query: 406 TAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEM 465
           T E    DGWLHTGDIG +D  G + I  RKKD     KG  V+P  +E  L     +  
Sbjct: 429 T-EKVLKDGWLHTGDIGEIDDRGRIRITDRKKDLIVNDKGDNVSPQKVEGMLTLQPEIGQ 487

Query: 466 MCLIGSGLPAPILLAVPHNFPHF--------------DRARYERTTQKVIARINSELESH 511
             + G   P  + L VP +                  D   Y    +  + R+N +L   
Sbjct: 488 AMVYGDRRPHLVGLLVPDSEWTMEWAAANGRPIKGITDDPTYLAALRAAVDRVNDDLSVI 547

Query: 512 EQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKYHD 548
           E+++  ++  +P++I+N  LTP++KI+RHV+ K+Y D
Sbjct: 548 ERVRRFILADEPFAIENEELTPSMKIRRHVIRKRYQD 584