Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  103 bits (256), Expect = 2e-26
 Identities = 123/496 (24%), Positives = 211/496 (42%), Gaps = 78/496 (15%)

Query: 4   IQPNQFNHPPCALPPPNEMLLRWAKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSAL 63
           + PN+ NH P +   P   L R A+  P    +     R    ++Y ++ +++  L SAL
Sbjct: 10  LAPNEANHVPLS---PLSFLKRAAQVYPQRDAVIYGARR----YSYRQLHERSRALASAL 62

Query: 64  RALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKILI 123
             +G  PG++VA+++ N  E       +     + V I       +I + L H  +K+LI
Sbjct: 63  ERVGVQPGERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVLI 122

Query: 124 VGK---LDDNKATAHVLAERPNLISISLPYPSAAKCQYE--FQTLIKQHQPSEERPTHFD 178
             +      N+A A +L   P L+ I       A   ++  ++  + Q  P+       +
Sbjct: 123 CDREFGAVANQALA-MLDAPPLLVGIDDDQAERADLAHDLDYEAFLAQGDPARPLSAPQN 181

Query: 179 E-KLMSIVYTSGTSGQPKGAMLTY-GAFTWS-AQQLINHIGIEENDRLFSYLPLAHITER 235
           E + ++I YTSGT+G PKG +L + GA+  + A  LI  +G          LP+ H    
Sbjct: 182 EWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLG--PRSVYLWTLPMFHCNGW 239

Query: 236 VYIFGSSIIGGVLTAF----PESLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQK 291
            + +  ++ GG         P++++  I +   H  T   + P + ++         P  
Sbjct: 240 SHTWAVTLSGGTHVCLRKVQPDAINAAIAE---HAVTHLSAAPVVMSMLIHAEHASAPPV 296

Query: 292 KLNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMT 351
            ++++                            G+AP S A++    + G NIT A+GMT
Sbjct: 297 PVSVITG--------------------------GAAPPS-AVIAAMEARGFNITHAYGMT 329

Query: 352 ESFAYSTL--------NYPF--RADKIGTVGNAGPGIELKIAEDE--------------E 387
           ES+  STL          P   RA  +   G A P +E     D               E
Sbjct: 330 ESYGPSTLCLWQPGVDELPLEARAQFMSRQGVAHPLLEEATVLDTDTGRPVPADGLTLGE 389

Query: 388 ILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKF 447
           ++VR   +  GY  N  AT  +  + GWLHTGD+  L  +GY+ I+ R KD    + G+ 
Sbjct: 390 LVVRGNTVMKGYLHNPEATRAALAN-GWLHTGDLAVLHLDGYVEIKDRAKDII-ISGGEN 447

Query: 448 VAPVPIEKKLFEYSRV 463
           ++ + IE+ L+++  V
Sbjct: 448 ISSLEIEEVLYQHPEV 463