Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  169 bits (429), Expect = 2e-46
 Identities = 147/588 (25%), Positives = 274/588 (46%), Gaps = 69/588 (11%)

Query: 22  MLLRWAKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNC 81
           +L R A+   N V +++     + E T++++ D  L   + + +LG    D + ++  N 
Sbjct: 10  ILARNAELLGNRVAMREKHLGIWQETTWSQMLDTTLAYAAGMESLGFSAEDALLVLGDNR 69

Query: 82  AEWFICDLAM-MLGDYISVPIFPTAGSETIDYCLEHSESKILI---------VGKLDDNK 131
              ++  LA  +LG Y ++P++ TA  + I + +  +  + ++         V  L D  
Sbjct: 70  PRLYMGMLAAGVLGGY-AMPVYSTATPDEIRHFMHETHVRFVLAEDQEQVDKVLDLGDQG 128

Query: 132 ATA-HVLAERPNLISISLPYPSAAKCQYEFQTLIKQHQPSEE---RPTHFDEKLMS---- 183
           AT  +++ + P  ++    Y +     +E    I   +   E   R    +  L      
Sbjct: 129 ATIKNIIYDEPRGLT---NYSNPGLISWEKLQAIGADRLRAEPKLRNALIERALPDGPAV 185

Query: 184 IVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFGSSI 243
            V++SGT+G+PKG +L++  F    +           + + +YLP+A + +     G+ +
Sbjct: 186 FVHSSGTTGKPKGVVLSHRNFLAGVRNAHRGGAFTFGETILAYLPMAWVGDFAITVGAGV 245

Query: 244 IGGVLTAFPESLDTFIEDVKMHRPTLFISVPRLW----TLFQQRIQDKLPQKK------L 293
                   PE  +T + D++   PT +++ PR W    T  Q R++D  P KK      +
Sbjct: 246 ALHFTINIPERQETVLHDLREVAPTFYLAAPRSWDNMLTTIQVRMEDSTPLKKWLYDVFM 305

Query: 294 NILL---------KIPFVNSLIKRKLA---------DGLGLDQARVLGCGSAPVSPALLE 335
           N  L         K P +   + R+L          D LGL + R    G   +      
Sbjct: 306 NSALASERRKLEGKQPSLTERLMRQLGEWLIFGPIKDQLGLTRLRGAFTGGEAIGEDTFV 365

Query: 336 WYRSVGLNITEAWGMTESFAYSTLNYPFRADKIGTVGNAGPGIELKIAEDEEILVRSKGL 395
           +YR++G+ + + +G TES A++ L       ++ TVG   PG+E+KI ++ E+L+RS  +
Sbjct: 366 FYRALGVKLRQFYGQTESSAFTALQDTEEV-RLHTVGKPLPGVEVKIGDNGEVLIRSGSV 424

Query: 396 FAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEK 455
           F+GYYK + AT E+  +DGWL+TGD G ++ +G++ + GR  +   T+KG+   P  IE 
Sbjct: 425 FSGYYKLENATREAL-EDGWLYTGDAGYIEPDGHMVVLGRLSEVVYTSKGERYIPNYIEN 483

Query: 456 KLFEYSRVEMMCLIGSGLP--APILLAVPHNFPHFDRAR------YERTTQK-------- 499
           +L     ++ + ++GSG    A I+        H+   R      Y   +QK        
Sbjct: 484 RLKFSPYIKDVAVLGSGRDTLAAIICIDMEPVGHWAEVRGISYMSYADLSQKPEVIELVT 543

Query: 500 -VIARINSELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKY 546
             + R+NS L    ++   + +   +  D+G +T T K++R+V+E++Y
Sbjct: 544 AAVKRVNSILPDGLKLHHFVSLHKEFDPDDGEVTRTRKLRRNVVEERY 591