Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  215 bits (548), Expect = 4e-60
 Identities = 169/595 (28%), Positives = 276/595 (46%), Gaps = 72/595 (12%)

Query: 21  EMLLRWAKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKN 80
           ++L  WA+  P+ +  ++     +   T+    + A R    L++LG D GD++A+ S++
Sbjct: 18  KLLQHWAQRFPDALAFREKDYGIWNRMTWQHYFETARRFALGLKSLGFDKGDRLAIASED 77

Query: 81  CAEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAER 140
             +W   DLA      + V I+PT     + Y + HS SK ++ G  +        +A+ 
Sbjct: 78  SPQWMFTDLATQAIGGVVVGIYPTNPWPELQYIVHHSNSKFVVCGDQEQVDKVLDAMAKH 137

Query: 141 ----PNLISIS---------------LPYPSAAKCQYEFQTLIKQHQPSEERP---THFD 178
               P+L+ I                + +    +   +      QH  + +R    T  D
Sbjct: 138 DTGLPDLVKIICVDMKGMRGYKHDKLMSFEDVLELGDQNAAASPQHASAFDRAIEDTQPD 197

Query: 179 EKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEE-NDRLFSYLPLAHITERVY 237
           +  M +VYTSGT+G PKGAML++     +  +L  H  ++  N  +  YLPL H+ ER +
Sbjct: 198 DTCM-LVYTSGTTGPPKGAMLSHRNLIVTVDKLKTHFKLDRHNYEVVCYLPLCHVAERAF 256

Query: 238 IFGSSIIGGVLTAFPESLDTFIEDVKMHRPTLFISVPRLWTLFQQ----RIQDKLP---- 289
                ++ G +  + ES+DT   +++   PT+F+ VPR+W   QQ    R+QD       
Sbjct: 257 STVMHLLTGGVVNYAESIDTVAVNLREIAPTVFLGVPRIWEKLQQGILIRMQDASRFQRW 316

Query: 290 ---------------------QKKLNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAP 328
                                Q+ L+  L    +  L+ R L   +GLD+ +   CG A 
Sbjct: 317 AFQRCFDAGRRLFEKVEAQGGQRSLSDRLHFFVLWLLMFRNLQKFVGLDRMQCGFCGGAS 376

Query: 329 VSPALLEWYRSVGLNITEAWGMTESFAYSTLNYPFRADKIGTVGNAGPGIELKIAEDEEI 388
           VSP +L+++R +G+ + + +GMTES       +  +A K+G  G    G+  KIAED E+
Sbjct: 377 VSPEVLKFFRILGIPVYQVYGMTESGGVIFFQHE-KAIKLGATGLPIDGLNWKIAEDGEL 435

Query: 389 LVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFV 448
           +V+   +F GY  ++ ATA++  D GWLHTGDI +L   G L I  RKK    T+ GK +
Sbjct: 436 VVKHPAVFKGYIHDEGATAKTVVD-GWLHTGDIVALADNGELMIVDRKKAIIITSGGKNI 494

Query: 449 APVPIEKKLFEYSRVEMMCLIGSG---LPAPILLAVPHNFPHFDRARYERTTQKVIA--- 502
           AP  IE  L +   V    ++G G   L A I +            +   TT K +A   
Sbjct: 495 APSEIENALKDSLYVREAIILGDGRHYLAALIQVDYETVGKWAQERKLAYTTYKSLAALP 554

Query: 503 -----------RINSELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKY 546
                      R+N      E I+  L+++     D+G LT T K++R+V+EK +
Sbjct: 555 EVRELIDEDVKRVNKLFARVENIRKFLILEKELDHDDGELTATQKVRRNVIEKTF 609