Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  208 bits (529), Expect = 6e-58
 Identities = 165/591 (27%), Positives = 267/591 (45%), Gaps = 75/591 (12%)

Query: 27  AKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFI 86
           A+ER  +V L++ I+  +   T+ E    A R+   L  LG   GD++ +  ++  EWF 
Sbjct: 9   AQERGAQVALREKIHGIWQGRTWLEYYQTARRVAHGLTKLGLQRGDRIVIAGEDVPEWFY 68

Query: 87  CDL-AMMLGDYISVPIFPTAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLIS 145
            DL A M+G  + V I+PT     + Y   H ++K+ + G  +        + E P L  
Sbjct: 69  ADLGAQMIGVQV-VGIYPTNPWAEVQYIAGHCQAKLAVTGDQEQTDKVLDAMREGPGLPH 127

Query: 146 ISLPYPSAAKC--QYE------FQ-------TLIKQHQPSEERPTHFDEKLMS-----IV 185
           +   +    K   +YE      FQ        L+ +   +E+R     + L+      +V
Sbjct: 128 LEHIFCVDMKGLRRYEPGRPHAFQHLLDLGDQLVAEDPLAEQRLDGQIDALVPDDVNILV 187

Query: 186 YTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFS---YLPLAHITERVYIFGSS 242
           YTSGT+G PKGAMLT+  F + A   +  +  +   + F    YLPL H+ ER Y     
Sbjct: 188 YTSGTTGPPKGAMLTHRNFVYGAYAYM--VARQMTGKPFESVCYLPLCHVAERTYSTVQH 245

Query: 243 IIGGVLTAFPESLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQ------------ 290
           +I G    F ES+DT   +++   PT F+ VPR+W   QQ  + ++              
Sbjct: 246 LISGGTINFAESIDTVATNIREIGPTFFLGVPRIWEKLQQGFEFRMKDSGRAQRWLYRLG 305

Query: 291 -----------------KKLNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPAL 333
                            K L   L+  F   L+ R +   +GL++     CG A VSP  
Sbjct: 306 MKRGRALSDRRAEHGHLKSLGDRLEFGFWYLLLFRNMQRHMGLNRTHTRMCGGASVSPET 365

Query: 334 LEWYRSVGLNITEAWGMTESFAYSTLNYPFRADKIGTVGNAGPGIELKIAEDEEILVRSK 393
           L+++  +GL + + +G+TE+   + +  P R    G+ G A  G+E ++  D E+ VRS 
Sbjct: 366 LKFFDIIGLPVGQGYGLTEAGGLAFVQVPGRPFIRGSCGPAMEGVEWRVEADGEVFVRSP 425

Query: 394 GLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPI 453
           G+F GY  +D  T +  + DGW+ TGDI     EG + +  RKK    T+ GK +AP  I
Sbjct: 426 GVFTGYLFDDKGTKDILSADGWIATGDIVEKHGEGEIVVVDRKKAIIITSGGKNIAPSEI 485

Query: 454 EKKLFEYSRVEMMCLIGSGLPAPILLAVPHNFPHFDRARYER----TTQK---------- 499
           E  + +   V    ++G G    +   V  +F    R   ER    TT K          
Sbjct: 486 ENAIKDSPFVREAIVVGEGKKF-LGGLVQIDFDTVGRWAAERDLQYTTYKSLTLLPEVIE 544

Query: 500 ----VIARINSELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKY 546
               V+  +NS     E ++  ++++     D+G LT T K++R ++ KK+
Sbjct: 545 LVQGVVDEVNSRFARVENVRKFVLLEKELDHDDGELTATQKVRRGLINKKF 595