Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  114 bits (286), Expect = 8e-30
 Identities = 130/502 (25%), Positives = 209/502 (41%), Gaps = 94/502 (18%)

Query: 13  PCALPPPNEMLL-----------------RWAKERPNEVYLKQIINRQFVEFTYAEVADK 55
           P + PP N+ LL                 R A+ +P++V+L  + + +   +T+AE+   
Sbjct: 3   PISTPPSNQRLLTELGYCLDDLTIDAVLRRQARAQPDKVFLTWLPDGR--TWTFAELERV 60

Query: 56  ALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSETIDYCLE 115
             RL  A  ALG   G  VAL+  N  E   C  A+     +SVPI   +  + ++Y L 
Sbjct: 61  TRRLAHAFTALGWKKGTHVALMLDNSPEHLFCAFALGRMGAVSVPINTASKGQLLEYYLA 120

Query: 116 HSESKILIVGKLDDNKATAHVLAERPN-------LISISLPYPSAAKC-----QYEFQTL 163
            S+S  +IV     + A    +A  P+       ++  + P P  A       +  + TL
Sbjct: 121 QSDSTAVIV-----DAALRERIAPLPSAGRLAQVVVLDAAPVPGTAAVDEVPGELSYSTL 175

Query: 164 IK---QHQPSEERPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEEN 220
                   P E     +D  L  + YTSGT+G  KG ML+  A          H G   +
Sbjct: 176 YNAAPADTPFEADVAPWD--LACLAYTSGTTGPSKGNMLSQAANLAFGLSNAEHHGYRPD 233

Query: 221 DRLFSYLPLAHI------TERVYIFGSSIIGGVLTAFPESLDTFIEDVKMHRPTLFISVP 274
           D ++  LPL H+      T  V + G+S+   + T F  S   F++DV+    T+     
Sbjct: 234 DVMYVCLPLFHVNALQTATHAVLLTGASL--AMTTRF--SASRFLDDVRKCGATV----- 284

Query: 275 RLWTLFQQRIQDKLPQKKLNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPALL 334
                        L     N L   P          AD    D + +    + PV     
Sbjct: 285 -----------TNLLGALCNFLWSQP--------ATAD----DTSSLRIVSAVPVPRFAR 321

Query: 335 EWYRSVGLNITEAWGMTESFAYSTLNYPFRADKIGTVGNAGPGIELKIAEDE-------- 386
            +    GL IT A+G+++    +      RADK+G+ G A     ++IA+D         
Sbjct: 322 AFEERFGLRITSAYGLSDHGMVAAYTVADRADKLGSAGRARRHYTIRIADDHDVEVPRGV 381

Query: 387 --EILVRSKGLF---AGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFK 441
             EIL+R +  +    GYY    AT  ++  +GW HTGD+  +D +GYL    RKKD  +
Sbjct: 382 PGEILLRVEVPWLASTGYYNMPEATLGAWR-NGWFHTGDLAYMDEDGYLFFVDRKKDAIR 440

Query: 442 TAKGKFVAPVPIEKKLFEYSRV 463
             +G+ V+   +++ +  + +V
Sbjct: 441 -RRGENVSAFEVQQIICTHPKV 461