Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  120 bits (301), Expect = 1e-31
 Identities = 106/468 (22%), Positives = 187/468 (39%), Gaps = 47/468 (10%)

Query: 39  IINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYIS 98
           +++     +TYA +   A RL + L + G  PGD+VA       E+ +  LA +    +S
Sbjct: 43  VVDNHGASWTYAALDYAASRLANWLLSQGIQPGDRVAFQLPGWCEFTLIYLACLKTGAVS 102

Query: 99  VPIFPTAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLIS-----ISLPYPSA 153
           VP+ P      + + L   ++KI     +        ++    N +      + +   + 
Sbjct: 103 VPLLPAWREAELVWVLNKCQAKIFFAPTVFKQNRPVDLILPLQNQLRHLTHIVGVDKLAP 162

Query: 154 AKCQYEFQTLIKQHQPSEERPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLIN 213
           A        +I + +P +       ++L ++++TSGT G PKG MLT+     S +    
Sbjct: 163 ATTALALSQIIDRSEPLQSDINIHGDELAAVLFTSGTEGMPKGVMLTHNNILASERAYCA 222

Query: 214 HIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPESLDTFIEDVKMHRPTLFISV 273
            + +   D      PL H T          + GV   F     + + D+       F   
Sbjct: 223 RLNLTWQDVFLMPAPLGHAT--------GFLHGVTAPFLIGARSVLLDI-------FTPE 267

Query: 274 PRLWTLFQQRIQDKLPQKKLNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPAL 333
             L  L QQR                PF+  L+         L   R   CG   +   +
Sbjct: 268 ACLTLLAQQRCTCMSGAT--------PFIYDLLCAIEQQPADLSSLRFFLCGGTTIPKKV 319

Query: 334 LEWYRSVGLNITEAWGMTESFAYSTLNYPFRADKI-GTVGNAGPGIELKIAEDE------ 386
               +  G+ +   +G TES  +S +N      ++  T G A  G+E+KI +++      
Sbjct: 320 ARDCQQRGIKLLSIYGSTESSPHSMVNLGDSTSRMMNTDGYAATGVEIKIVDEDRNTLPA 379

Query: 387 ----EILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKT 442
               E   R   +F GY      TA + +++GW ++GD+  +D +GY+ I GRKKD    
Sbjct: 380 GHEGEEASRGPNVFMGYLDEPELTARALDNEGWYYSGDLCRMDEDGYIKITGRKKDII-I 438

Query: 443 AKGKFVAPVPIEKKLFEYSRVEMMCLI-------GSGLPAPILLAVPH 483
             G+ ++   +E  L ++ R+   C++       G    A ++L  PH
Sbjct: 439 RGGENISSREVEDILLQHPRIHDACVVAMPDERLGERSCAYVVLKPPH 486