Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., short chain acyl-CoA synthetase, anaerobic (RefSeq) from Escherichia coli BW25113

 Score =  115 bits (288), Expect = 4e-30
 Identities = 102/481 (21%), Positives = 195/481 (40%), Gaps = 50/481 (10%)

Query: 27  AKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFI 86
           A+  P+++    +++     +TY+ +   A  L + + A G + GD++A       E+ +
Sbjct: 34  ARAMPDKI---AVVDNHGASYTYSALDHAASCLANWMLAKGIESGDRIAFQLPGWCEFTV 90

Query: 87  CDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLIS- 145
             LA +    +SVP+ P+     + + L   ++K+     L        ++    N +  
Sbjct: 91  IYLACLKIGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQ 150

Query: 146 ----ISLPYPSAAKCQYEFQTLIKQHQPSEERPTHFDEKLMSIVYTSGTSGQPKGAMLTY 201
               + +   + A        +I  +       T   ++L ++++TSGT G PKG MLT+
Sbjct: 151 LQQIVGVDKLAPATSSLSLSQIIADNTSLTTAITTHGDELAAVLFTSGTEGLPKGVMLTH 210

Query: 202 GAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPESLDTFIED 261
                S +     + +   D      PL H T  ++   +  + G  +     LD F  D
Sbjct: 211 NNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVL---LDIFTPD 267

Query: 262 VKMHRPTLFISVPRLWTLFQQRIQDKLPQKKLNILLKIPFVNSLIKRKLADGLGLDQARV 321
             +              L +Q       Q+   +L   PFV  L+         L   R 
Sbjct: 268 ACL-------------ALLEQ-------QRCTCMLGATPFVYDLLNVLEKQPADLSALRF 307

Query: 322 LGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNYPFRADK-IGTVGNAGPGIEL 380
             CG   +   +    +  G+ +   +G TES  ++ +N      + + T G A  G+E+
Sbjct: 308 FLCGGTTIPKKVARECQQRGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEI 367

Query: 381 KIAEDE----------EILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYL 430
           K+ +D           E   R   +F GY+     TA + +++GW ++GD+  +D  GY+
Sbjct: 368 KVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYI 427

Query: 431 TIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLI-------GSGLPAPILLAVPH 483
            I GRKKD      G+ ++   +E  L ++ ++   C++       G    A ++L  PH
Sbjct: 428 KITGRKKDII-VRGGENISSREVEDILLQHPKIHDACVVAMSDERLGERSCAYVVLKAPH 486

Query: 484 N 484
           +
Sbjct: 487 H 487