Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., medium-chain fatty-acid--CoA ligase from Escherichia coli ECRC62

 Score =  115 bits (289), Expect = 3e-30
 Identities = 100/469 (21%), Positives = 189/469 (40%), Gaps = 47/469 (10%)

Query: 39  IINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYIS 98
           +++     +TY+ +   A  L + + A G + GD++A       E+ +  LA +    +S
Sbjct: 7   VVDNHGASYTYSALDHAASCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKTGAVS 66

Query: 99  VPIFPTAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLIS-----ISLPYPSA 153
           VP+ P+     + + L   ++K+     L        ++    N +      + +   + 
Sbjct: 67  VPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAP 126

Query: 154 AKCQYEFQTLIKQHQPSEERPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLIN 213
           A        +I  +       T   ++L ++++TSGT G PKG MLT+     S +    
Sbjct: 127 ATSSLSLSQIIADNTSLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCA 186

Query: 214 HIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPESLDTFIEDVKMHRPTLFISV 273
            + +   D      PL H T  ++   +  + G  +     LD F  D  +         
Sbjct: 187 RLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVL---LDIFTPDACL--------- 234

Query: 274 PRLWTLFQQRIQDKLPQKKLNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPAL 333
                L +Q       Q+   +L   PFV  L+         L   R   CG   +   +
Sbjct: 235 ----ALLEQ-------QRCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIPKKV 283

Query: 334 LEWYRSVGLNITEAWGMTESFAYSTLNYPFRADK-IGTVGNAGPGIELKIAEDE------ 386
               +  G+ +   +G TES  ++ +N      + + T G A  G+E+K+ +D       
Sbjct: 284 ARECQQRGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDARKTLPP 343

Query: 387 ----EILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKT 442
               E   R   +F GY+     TA + +++GW ++GD+  +D  GY+ I GRKKD    
Sbjct: 344 GCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDII-V 402

Query: 443 AKGKFVAPVPIEKKLFEYSRVEMMCLI-------GSGLPAPILLAVPHN 484
             G+ ++   +E  L ++ ++   C++       G    A ++L  PH+
Sbjct: 403 RGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHH 451