Pairwise Alignments

Query, 384 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., Cyclic di-GMP phosphodiesterase response regulator RpfG from Alteromonas macleodii MIT1002

 Score = 87.4 bits (215), Expect = 8e-22
 Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 16/191 (8%)

Query: 191 KERISRYARIIALD--VADQYALDDELIENISQFATCHDLGKLALPADLLQKRASLANHE 248
           KE      R+I +   ++++  +  E IE I   A  HD+GK+++P  +L K   L   E
Sbjct: 329 KETGGHVRRVILMTEFLSEKLHMSREFIETIRYSAALHDVGKISIPETILHKPGKLDPEE 388

Query: 249 KEQVHNHIEYGIDLL---NEVIAKLGTPHHPCLAVLREIMAYHHEFLDGSGYPFGLVSDQ 305
            E +  H + G +LL   + ++AK+G            I   HHE  DG GYP GL  D 
Sbjct: 389 WEIMKTHAQKGYELLAGSDRIVAKMGAI----------IAKTHHERWDGQGYPEGLAGDD 438

Query: 306 IPIPARIIAVANIFDALTAHRPYKQAQSIPHALLELEKMVSDGKLDRHCVNALRENQEEL 365
           IP+  RI+A+ ++ DAL + R YK A S P  +       S  + D    + + E+ + +
Sbjct: 439 IPVEGRIMAIVDVVDALLSKRCYKPAWS-PEEVKAYLHENSGKQFDPLITHIMIEHFDRI 497

Query: 366 KEIVARFPEQD 376
            EI A  P++D
Sbjct: 498 LEIRATEPDED 508