Pairwise Alignments

Query, 384 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., Cyclic di-GMP phosphodiesterase response regulator RpfG from Alteromonas macleodii MIT1002

 Score = 79.3 bits (194), Expect = 2e-19
 Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 12/193 (6%)

Query: 182 EHWLHIKQHKERISRYARIIALDVADQYALDDELIENISQFATCHDLGKLALPADLLQKR 241
           EH  +   +  R+   A+++A    ++  L+++ I  +      HD+G   +P  +L K 
Sbjct: 339 EHESNASNNLTRMVEMAQLLA----EKVGLNEQDIHALRLAVPLHDIGTSIVPKSILHKT 394

Query: 242 ASLANHEKEQVHNHIEYGIDLLNEVIAKLGTPHHPCLAVLREIMAYHHEFLDGSGYPFGL 301
             L   E  ++  H E+G  +L +          P + +   +   HHE  DG GYP GL
Sbjct: 395 TPLTEEEVFKIRQHAEFGYQILRD-------SSRPTIQLAAMLAKQHHERWDGKGYPDGL 447

Query: 302 VSDQIPIPARIIAVANIFDALTAHRPYKQAQSIPHALLELEKMVSDGKLDRHCVNALREN 361
             ++I I +RI  + ++FDAL   RPYK A +I      L K  S    D   V  +  +
Sbjct: 448 EGEEIDIKSRIATLVDVFDALLNARPYKPAWTIDKVEAVL-KEESGKHFDPDLVQCMLND 506

Query: 362 QEELKEIVARFPE 374
                 I A+FP+
Sbjct: 507 LPAFMAIQAQFPD 519