Pairwise Alignments

Query, 380 a.a., chorismate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., Chromate transport protein ChrA from Variovorax sp. SCN45

 Score =  111 bits (277), Expect = 5e-29
 Identities = 110/416 (26%), Positives = 169/416 (40%), Gaps = 55/416 (13%)

Query: 5   FRTFFALGWVSFGGPAAHIGYFRHTFVEKLRWVSEQEYAQFVALSQFLPGPGSSQVGFAI 64
           FR +  LG++SFGGPA  I       VE+ RW+SE+ +   +     LPGP + Q+   I
Sbjct: 25  FRFWLKLGFISFGGPAGQIAIMHTELVERRRWISEKRFLHALNFCMLLPGPEAQQLATYI 84

Query: 65  GYHRGGLAGAWAAFLGFTLPSVLIMLLLAGLSSHLLDTPLFEQMIHGLKLLAIIVVADAC 124
           G+      G   A   F LPS+ I++ L+ +     + P    + +G+K     +V  A 
Sbjct: 85  GWLMHKTRGGIVAGALFVLPSLFILIALSWIYIRFGNVPAVAGVFYGIKPAITALVLHAA 144

Query: 125 LTMYRNFCQQRLTAGLCVLTAV----------AITLAPGLITQFAVLLIAAF--VGQARL 172
             +     +     G+     V          AI LA G+I  F      A   +G    
Sbjct: 145 HRIGSRALRNGWMWGIAAAAFVAIFAFDTPFPAIVLAAGVIGHFGAKRAPAVFALGGGHG 204

Query: 173 APQQSFST------------TTFSPSWLSLLLFASL---LLGLPLLAA----SSPLVELF 213
           A +QS+                FS S L  +L   L   L  + +L A    S  L ++ 
Sbjct: 205 AARQSYGAALIDDDTPTPPHARFSRSGLIKVLGIGLGLWLAAMGILVAVQGLSGTLTQMG 264

Query: 214 GHFFQAGSLVFGGGHVVLPLLQNALGDS---LSTDQFLTGYAAAQAVPGPMFTLATYLGY 270
             F +A  L FGG + VLP +     +    L+  Q + G A  +  PGP+  +  ++G+
Sbjct: 265 WFFTKAALLTFGGAYAVLPYVYQGAVEQHHWLTGTQMIDGLALGETTPGPLIMVVAFVGF 324

Query: 271 -------VLTPE-MPVVGALIATLA---VFLPGFLLLLGVLKNWSALAQRPKVAGAMQGV 319
                  VL P+ + + GAL AT+     FLP F+ +L       A   +      +  +
Sbjct: 325 VGGWLHQVLGPDSLFLAGALAATVVTFFTFLPSFVFILAGGPAIEATHGKLGFTAPLSAI 384

Query: 320 NACVVGLLLAA----LYQPVWSSTVHAPLD------WAALLVGFFLFKVLRLPLIG 365
            A VVG++L       Y  +W        D        A  +  F FKV  LPL+G
Sbjct: 385 TAAVVGVILNLALFFAYHVLWPQGFGGRFDAVSAAIAVAAAIALFRFKVGVLPLLG 440