Pairwise Alignments

Query, 380 a.a., chorismate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., Chromate transport protein ChrA from Sphingobium sp. HT1-2

 Score =  103 bits (256), Expect = 1e-26
 Identities = 106/428 (24%), Positives = 169/428 (39%), Gaps = 67/428 (15%)

Query: 6   RTFFALGWVSFGGPAAHIGYFRHTFVEKLRWVSEQEYAQFVALSQFLPGPGSSQVGFAIG 65
           R +  +  +SFGGPA  I       VE+ RW+ E+ +   +     LPGP + Q+   IG
Sbjct: 26  RVWIRVALLSFGGPAGQIAVMHRILVEEKRWIGEERFLHALNYCMLLPGPEAQQLAVYIG 85

Query: 66  YHRGGLAGAWAAFLGFTLPSVLIMLLLAGLSSHLLDTPLFEQMIHGLKLLAIIVVADACL 125
           +      G   A   F LP  L +L L+ +   L + PL E +  GLK   + VV  A +
Sbjct: 86  WLLHKTKGGLVAGALFVLPGFLAILGLSYVYVLLGEVPLVEGLFFGLKAAVLAVVLQAVV 145

Query: 126 TMYRNFCQQRLTAGLCVLTAVAITL--APGLITQFAVLLIAAFVGQARLA---------- 173
            +     +  +  G   L  VAI +   P  +   A  LI  F G+A  A          
Sbjct: 146 RVGSRALKNNVMRGFAALAFVAIFVLDVPFPLIVLAAALIGFFSGRAGYAAFKGGGGHGP 205

Query: 174 -----------------PQQSFSTTTFSPSWLSLLLFASLLLGLPLLAASSP---LVELF 213
                            P  +    ++S     +LL   L     LL A  P      + 
Sbjct: 206 AGAEIIHDRDTALGEGLPDHARPNLSWSLRISGVLLLLWLGPVAALLFAFGPDDVFSRIA 265

Query: 214 GHFFQAGSLVFGGGHVVLPLLQNALGDS---LSTDQFLTGYAAAQAVPGPMFTLATYLGY 270
             F Q   + FGG + VL  +     ++   L   + L G   A+  PGP+  +  ++G+
Sbjct: 266 TFFSQMAVMTFGGAYAVLAYVAQEAVETYGWLQPGEMLDGLGMAETTPGPLIMVTQFVGF 325

Query: 271 V-----LTPEMPVV----GALIATLAVFLPGFLLLLGVLKNWSALAQRPKVAGAMQGVNA 321
           +      T   P+V    GA++ T   FLP FL +         L     ++ A+  + A
Sbjct: 326 LAAFREATGLPPLVAATFGAILTTWVTFLPCFLWIFAGAPFIERLRGNRALSAALSAITA 385

Query: 322 CVVGLLL--------AALYQ-----PVWSSTVHAP----LDWAAL------LVGFFLFKV 358
            VVG++L          L++     P  + T+  P    ++W AL      ++  F FK 
Sbjct: 386 AVVGVILNLAVWFGIHTLFEQVREVPFAAGTIDLPVLTSVNWPALALAVGAILAMFRFKA 445

Query: 359 LRLPLIGM 366
             LP++G+
Sbjct: 446 GMLPVLGV 453