Pairwise Alignments

Query, 380 a.a., chorismate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., Chromate transporter from Pseudomonas putida KT2440

 Score =  107 bits (267), Expect = 7e-28
 Identities = 110/398 (27%), Positives = 167/398 (41%), Gaps = 65/398 (16%)

Query: 11  LGWVSFGGPAAHIGYFRHTFVEKLRWVSEQEYAQFVALSQFLPGPGSSQVGFAIGY--HR 68
           LG+VSFGGPA  I       VE+ RW+SE+ +   +     LPGP + Q+   IG+  HR
Sbjct: 28  LGFVSFGGPAGQIAIMHQELVERRRWISERRFLHALNYCMLLPGPEAQQLATYIGWLMHR 87

Query: 69  ---GGLAGAWAAFLGFTLPSVLIMLLLAGLSSHLLDTPLFEQMIHGLKLLAIIVVADACL 125
              G +AGA      F LPS+ I++ L+ +     + P+   +  G+K     +V  A  
Sbjct: 88  TWGGVIAGAL-----FVLPSLFILIGLSWVYLTWSEVPVVAGIFEGIKPAVTAIVVHAA- 141

Query: 126 TMYRNFCQQRLTAGLCVLTAVAITLAPGLITQFAVLLIAA----FVG----QARLAPQQS 177
             +R   +      L  + A +      L   F ++++AA    +VG     A+ AP   
Sbjct: 142 --HRIGTRALKNGWLWAIAAASFVAIFALDVPFPLIVLAAALLGYVGGRLRPAQFAPGGG 199

Query: 178 FSTTTFSP-----------------SW----LSLLLFASL-LLGLPLLAAS----SPLVE 211
            S                       SW      LL  ASL LL + LL A+      L +
Sbjct: 200 HSAVRARQRPALIDDDTPIPAHACFSWGRLVTLLLTVASLWLLPMGLLMATFGWHGTLTQ 259

Query: 212 LFGHFFQAGSLVFGGGHVVLP-LLQNALGDS--LSTDQFLTGYAAAQAVPGPMFTLATYL 268
           +   F +A  L FGG + VLP + Q A+G    LS  Q + G A  +  PGP+  +  ++
Sbjct: 260 MGWFFTKAALLTFGGAYAVLPYVYQGAVGHYGWLSPTQMIDGLALGETTPGPLIMVVAFV 319

Query: 269 GYVLTPEMPVVGALIATLA-----------VFLPGFLLLLGVLKNWSALAQRPKVAGAMQ 317
           G+V     P+ GA  A LA            FLP FL +L       +     K    + 
Sbjct: 320 GFVGGYLQPMFGAHQAFLAGAVAAGLVTWFTFLPSFLFILAGGPLVESTHNELKFTAPLT 379

Query: 318 GVNACVVGLLLAAL----YQPVWSSTVHAPLDWAALLV 351
           G+ A VVG++L       Y  +W         W++ ++
Sbjct: 380 GITAAVVGVILNLALFFGYHVLWPDGFDGAFHWSSAVI 417



 Score = 45.4 bits (106), Expect = 3e-09
 Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 8/178 (4%)

Query: 205 ASSPLVELFGHFFQAGSLVFGGGHVVLPLLQNALGDS---LSTDQFLTGYAAAQAVPGPM 261
           AS  L +    + + G + FGG    + ++   L +    +S  +FL        +PGP 
Sbjct: 14  ASVGLGQALLFWLKLGFVSFGGPAGQIAIMHQELVERRRWISERRFLHALNYCMLLPGPE 73

Query: 262 FT-LATYLGYVLTPEMPVVGALIATLAVFLPGFLLLLGVLKNWSALAQRPKVAGAMQGVN 320
              LATY+G+++       G +IA     LP   +L+G+   +   ++ P VAG  +G+ 
Sbjct: 74  AQQLATYIGWLMHRTW---GGVIAGALFVLPSLFILIGLSWVYLTWSEVPVVAGIFEGIK 130

Query: 321 ACVVGLLLAALYQPVWSSTVHAPLDWAALLVGFFLFKVLRLPLIGMVGSTLLFGVLSG 378
             V  +++ A ++ + +  +     WA     F     L +P   +V +  L G + G
Sbjct: 131 PAVTAIVVHAAHR-IGTRALKNGWLWAIAAASFVAIFALDVPFPLIVLAAALLGYVGG 187



 Score = 36.2 bits (82), Expect = 2e-06
 Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 20/139 (14%)

Query: 7   TFFALGW-------VSFGGPAAHIGYFRHTFVEKLRWVSEQEYAQFVALSQFLPGP---G 56
           T   +GW       ++FGG  A + Y     V    W+S  +    +AL +  PGP    
Sbjct: 256 TLTQMGWFFTKAALLTFGGAYAVLPYVYQGAVGHYGWLSPTQMIDGLALGETTPGPLIMV 315

Query: 57  SSQVGFAIGY-------HRGGLAGAWAAFL--GFT-LPSVLIMLLLAGLSSHLLDTPLFE 106
            + VGF  GY       H+  LAGA AA L   FT LPS L +L    L     +   F 
Sbjct: 316 VAFVGFVGGYLQPMFGAHQAFLAGAVAAGLVTWFTFLPSFLFILAGGPLVESTHNELKFT 375

Query: 107 QMIHGLKLLAIIVVADACL 125
             + G+    + V+ +  L
Sbjct: 376 APLTGITAAVVGVILNLAL 394