Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  201 bits (510), Expect = 3e-56
 Identities = 121/331 (36%), Positives = 187/331 (56%), Gaps = 2/331 (0%)

Query: 1   MATIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTN 60
           MATIKDVA  AG+S  TVS V+NK+   S+     V +A+ +L Y P+A AR+L  ++T 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTTA 60

Query: 61  TIGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALV 120
           TIG+LV +  +P+F  L + ++    R G  +++ N    AE++R  L +L+  R D L+
Sbjct: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRNYLRVLLEKRIDGLI 120

Query: 121 IHSKALPNEELIEYANEVKT-LVLINRHIPQLADRCISLDNQKGAYLATDFLIRQGHRNI 179
           + S    +  L    + V+T +V+++R +  +    + +D+++GAYLAT  L+  GHR+I
Sbjct: 121 VTSVGGDDSGLAAGLSAVRTPMVIVDRALDGIDVDLVRIDHEEGAYLATRHLLELGHRDI 180

Query: 180 ACISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTNLLVKSLPFT 239
           ACI        A  R+AGY +AL E G+T++++  +++   S GG  A   LL ++ P +
Sbjct: 181 ACIGGPAHTRVAQMRLAGYHRALREAGVTVAANRTQESDFTSTGGYTAAVQLLTENPP-S 239

Query: 240 AVVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRYPIQLMAEKA 299
           A+ A ND +  G L    E    VP  +SVIGFDD  + RY+ P LTTV   I  + E A
Sbjct: 240 AIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLGETA 299

Query: 300 TQLALALATDAPRENDPMIFSPTIVRRDSVA 330
            +L L          D  I +P+IV R+S A
Sbjct: 300 AELLLRRIATPHMPIDQRIVTPSIVLRESTA 330