Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

 Score =  167 bits (423), Expect = 4e-46
 Identities = 112/350 (32%), Positives = 190/350 (54%), Gaps = 19/350 (5%)

Query: 1   MATIKDVAREAGVSVATVSRVIN-KSPKASQASIDTVTSAMHKLGYRPNAAARALVNQST 59
           ++ I DVA+ AGVS +TVS V+N +S + ++ ++  V +A+ +L YRPN +AR L    T
Sbjct: 1   VSRISDVAQRAGVSTSTVSNVLNGRSDRMAKETLARVEAAIRELKYRPNTSARQLKTGYT 60

Query: 60  NTIGVLVSDVSDPFFGTLVKAVDTVAH-REGKHLLIGNGYHRAEEERRALELLINSRCDA 118
             IG+LV  +++P +G + + V+T+A  R G  ++IGN Y  A++E    E L+      
Sbjct: 61  PLIGLLVPSMANPMYGFIAREVETLAQERYGFRIMIGNTYRDADKEAHFFEDLMAHGVRG 120

Query: 119 LVIHSKALPNEELIEYANEVKTLVLIN---RHIPQLADRC-----ISLDNQKGAYLATDF 170
           ++I S +L +E+ +E A   + LV+++   R  P  +        +++D+ + + +AT  
Sbjct: 121 VIIIS-SLVDEQHVEAAAS-RGLVVVSYDRRATPDASGGASVIDHVTVDSFESSRIATQH 178

Query: 171 LIRQGHRNIACISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPD-------SEG 223
           LI QGHR +A ++ S +     ++IAG+  A    G+  S+  +E    D       SE 
Sbjct: 179 LIEQGHRRLAFVTPSGRTMSRSEKIAGFLAAARGAGLEGSAQVVEGLPVDEYGDSMMSEL 238

Query: 224 GEQAMTNLLVKSLPFTAVVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRP 283
           G      L   ++  T V+  ND +A G +    + G SVP+ VSV+G D+  +S  + P
Sbjct: 239 GRMQAGQLAASAMRPTGVIGVNDLLAFGLMAGFRDAGLSVPQDVSVVGIDNVFLSTLMHP 298

Query: 284 RLTTVRYPIQLMAEKATQLALALATDAPRENDPMIFSPTIVRRDSVAQKR 333
            +T+VR P+  MA+   +  ++  +D        IF+PT+V RDSVA  R
Sbjct: 299 AMTSVRVPVPEMAQVMVERVMSRLSDPSMPTQEFIFAPTLVARDSVAPPR 348