Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  214 bits (544), Expect = 3e-60
 Identities = 125/331 (37%), Positives = 196/331 (59%), Gaps = 5/331 (1%)

Query: 1   MATIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTN 60
           MATI DV + AGVS ATVSRV+N++ +    + + V +AM +LGY+PN+ A+AL   +TN
Sbjct: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69

Query: 61  TIGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALV 120
           +IG+++      +FG+++   +  A + GK LL+ N  +  + E+ A+  L   RCDA++
Sbjct: 70  SIGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAIL 129

Query: 121 IHSKALPNEELIEYANEVKT-LVLINR--HIPQLADRCISLDNQKGAYLATDFLIRQGHR 177
           ++S+ L   +L+E   +  + LV++NR  H PQL      LD  + A LA   L+  GHR
Sbjct: 130 LYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQL--HSFGLDQTQIAQLAMQHLLNLGHR 187

Query: 178 NIACISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTNLLVKSLP 237
            IACI+S    E    R   YQQAL+E GI LSSS + +      GG QAM  LL + + 
Sbjct: 188 QIACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGIS 247

Query: 238 FTAVVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRYPIQLMAE 297
            TAV A ND+MA GA+  + E+G  VP+ VS+IG D+   + +  P L++V  PI  + +
Sbjct: 248 MTAVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQ 307

Query: 298 KATQLALALATDAPRENDPMIFSPTIVRRDS 328
           +A  LA+ +A   P++    ++  +++ R+S
Sbjct: 308 QAISLAVEIANKKPQDAQHRLYQGSLIARES 338