Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  342 bits (877), Expect = 8e-99
 Identities = 182/333 (54%), Positives = 233/333 (69%)

Query: 1   MATIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTN 60
           M TI+DVAR+AGVSVATVSRV+N S   S  + D V  A+  LGYRPNA A+AL  Q ++
Sbjct: 1   MITIRDVARQAGVSVATVSRVLNNSALVSPDTRDAVMQAVTLLGYRPNANAQALATQVSD 60

Query: 61  TIGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALV 120
           TIGV+V DVSD FFG LVKAVD VA +  K++LIGN YH AE+ER A+E+LI  RC+AL+
Sbjct: 61  TIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAEKERHAIEVLIRQRCNALI 120

Query: 121 IHSKALPNEELIEYANEVKTLVLINRHIPQLADRCISLDNQKGAYLATDFLIRQGHRNIA 180
           +HSKAL + EL ++ +++  +VLINR +P  A RC+ LDN  GA +AT  L+  GH+ I 
Sbjct: 121 VHSKALTDRELSDFMDQIPGMVLINRIVPGYAHRCVCLDNVSGARMATRMLLNNGHQRIG 180

Query: 181 CISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTNLLVKSLPFTA 240
            ++SSH+IED   R  G+  AL E GI  S S+I   +PD +GGE AM  LL ++L  TA
Sbjct: 181 YLASSHRIEDDAMRREGWLHALQEQGIAASESWIGTGTPDMQGGESAMVELLGRNLQLTA 240

Query: 241 VVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRYPIQLMAEKAT 300
           V AYNDNMAAGAL  L++NG ++P H+SVIGFDD  I+RY  P+LTTVRYPI  MA+ AT
Sbjct: 241 VFAYNDNMAAGALTALKDNGIAIPLHLSVIGFDDIPIARYTDPQLTTVRYPIASMAKIAT 300

Query: 301 QLALALATDAPRENDPMIFSPTIVRRDSVAQKR 333
           +LAL  A           F PT+VRR SVA ++
Sbjct: 301 ELALQGAAGTLDITATHCFMPTLVRRHSVAWRQ 333