Pairwise Alignments

Query, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) from Escherichia coli BW25113

 Score =  169 bits (428), Expect = 9e-47
 Identities = 113/340 (33%), Positives = 177/340 (52%), Gaps = 18/340 (5%)

Query: 1   MATIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTN 60
           MATIKDVA+ A VS  TVS VINK+   ++ + + V +A+ +L Y P+A AR+L    T 
Sbjct: 1   MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTK 60

Query: 61  TIGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALV 120
           +IG+L +     +F  +++AV+    ++G  L++GN ++  E++R  L ++   R D L+
Sbjct: 61  SIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLL 120

Query: 121 IHSKALPNEELIEYANEVKTLVLINRHIPQL--------ADRCIS-LDNQ-KGAYLATDF 170
           +     P E L+    E        RHIP +        AD   + +DN  +G Y+A  +
Sbjct: 121 VMCSEYP-EPLLAMLEEY-------RHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRY 172

Query: 171 LIRQGHRNIACISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTN 230
           LI +GHR I  I    +      R+AG+ +A+ E  I +  S+I +   + E G +AM  
Sbjct: 173 LIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQ 232

Query: 231 LLVKSLPFTAVVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRY 290
           +L +    TAV    D MA GAL   +E G  VP+ VS+IG+D+   +RY  P LTT+  
Sbjct: 233 ILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQ 292

Query: 291 PIQLMAEKATQLALALATDAPRENDPMIFSPTIVRRDSVA 330
           P   + E A  + L    +   E   +   P ++ R SVA
Sbjct: 293 PKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVA 332